RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 BFSP1Q12934 665 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 PRPF4BQ13523 1007 aaKnown RBP12.03□□□□□ -0.48
PKP4-215ENST00000494945 TRIM14Q14142 442 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 SNRNP35Q16560 246 aaKnown RBP12.03□□□□□ -0.48
PKP4-215ENST00000494945 TSHZ1Q6ZSZ6 1077 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 CTU1Q7Z7A3 348 aaKnown RBP12.03□□□□□ -0.48
PKP4-215ENST00000494945 USP37Q86T82 979 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 RSPH3Q86UC2 560 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 GPD1LQ8N335 351 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 DNAJB3Q8WWF6 145 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 TARS2Q9BW92 718 aaKnown RBP12.03□□□□□ -0.48
PKP4-215ENST00000494945 SEZ6LQ9BYH1 1024 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 GCOM2Q9BZD3 368 aaPredicted RBP12.03□□□□□ -0.48
PKP4-215ENST00000494945 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 ADAMTS10Q9H324 1103 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 MINDY3Q9H8M7 445 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 PAK6Q9NQU5 681 aaPredicted RBP12.03□□□□□ -0.48
PKP4-215ENST00000494945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.484e-6■■□□□ 12.6
PKP4-215ENST00000494945 CNTNAP2Q9UHC6 1331 aa12.03□□□□□ -0.48
PKP4-215ENST00000494945 HTTP42858 3142 aa12.02□□□□□ -0.48
PKP4-215ENST00000494945 A0A0B4J269 797 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 KBTBD13C9JR72 458 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 CLDN3O15551 220 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 EXTL3O43909 919 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 AFPP02771 609 aaKnown RBP12.02□□□□□ -0.49
PKP4-215ENST00000494945 HSPA8P11142 646 aaKnown RBP12.02□□□□□ -0.49
PKP4-215ENST00000494945 PROZP22891 400 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 ZNF200P98182 395 aaPredicted RBP12.02□□□□□ -0.49
PKP4-215ENST00000494945 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 TBX2Q13207 712 aaPredicted RBP12.02□□□□□ -0.49
PKP4-215ENST00000494945 ITGA7Q13683 1181 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 FAM47CQ5HY64 1035 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 ATF7IP2Q5U623 682 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 GDF6Q6KF10 455 aaPredicted RBP12.02□□□□□ -0.49
PKP4-215ENST00000494945 MPZL3Q6UWV2 235 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 SERINC5Q86VE9 423 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 CCDC150Q8NCX0 1101 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 PPP1R13LQ8WUF5 828 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 IQCDQ96DY2 449 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 MFSD14AQ96MC6 490 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 MSTO1Q9BUK6 570 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 NUP58Q9BVL2 599 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 ANKFY1Q9P2R3 1169 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 AGO2Q9UKV8 859 aaKnown RBP12.02□□□□□ -0.49
PKP4-215ENST00000494945 PHF24Q9UPV7 400 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
PKP4-215ENST00000494945 GTPBP10A4D1E9 387 aaKnown RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 STX10O60499 249 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 ERLIN2O94905 339 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 TPM1P09493 284 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 CCL5P13501 91 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
PKP4-215ENST00000494945 CRYBB1P53674 252 aaPredicted RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 MCL1Q07820 350 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.49
PKP4-215ENST00000494945 SYCP1Q15431 976 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 AMHR2Q16671 573 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 KIZQ2M2Z5 673 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 DCAF17Q5H9S7 520 aaPredicted RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 CCDC186Q7Z3E2 898 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 RPAINQ86UA6 219 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 CBWD2Q8IUF1 395 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 RDH13Q8NBN7 331 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 VTI1AQ96AJ9 217 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 SAAL1Q96ER3 474 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 ZBTB45Q96K62 511 aaPredicted RBP12.01□□□□□ -0.49
PKP4-215ENST00000494945 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 PTPRHQ9HD43 1115 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 TNFSF13BQ9Y275 285 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 SIK3Q9Y2K2 1263 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 SCN5AQ14524 2016 aa12.01□□□□□ -0.49
PKP4-215ENST00000494945 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
PKP4-215ENST00000494945 A0A1W2PQ45 241 aaPredicted RBP12□□□□□ -0.49
PKP4-215ENST00000494945 A0A1W2PQY0 241 aa12□□□□□ -0.49
PKP4-215ENST00000494945 GOLGA8IPA6NC78 632 aa12□□□□□ -0.49
PKP4-215ENST00000494945 GOLGA8JA6NMD2 632 aa12□□□□□ -0.49
PKP4-215ENST00000494945 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
PKP4-215ENST00000494945 M0QZ92 97 aa12□□□□□ -0.49
PKP4-215ENST00000494945 DNM1LO00429 736 aa12□□□□□ -0.49
PKP4-215ENST00000494945 ABLIM1O14639 778 aa12□□□□□ -0.49
PKP4-215ENST00000494945 OGTO15294 1046 aa12□□□□□ -0.49
PKP4-215ENST00000494945 N4BP1O75113 896 aaKnown RBP12□□□□□ -0.49
PKP4-215ENST00000494945 ADRB2P07550 413 aa12□□□□□ -0.49
PKP4-215ENST00000494945 IQCF3P0C7M6 154 aa12□□□□□ -0.49
PKP4-215ENST00000494945 DARSP14868 501 aaKnown RBP12□□□□□ -0.49
PKP4-215ENST00000494945 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
PKP4-215ENST00000494945 EIF4BP23588 611 aaKnown RBP12□□□□□ -0.49
PKP4-215ENST00000494945 AXLP30530 894 aa12□□□□□ -0.49
PKP4-215ENST00000494945 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
PKP4-215ENST00000494945 VAMP7P51809 220 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms