RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PARNO95453 639 aaKnown RBP5.92□□□□□ -1.46
SMC4-224ENST00000494612 OSMP13725 252 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 STAT5BP51692 787 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 MANFP55145 182 aaKnown RBP5.92□□□□□ -1.46
SMC4-224ENST00000494612 MCL1Q07820 350 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 UGT8Q16880 541 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 INAVAQ3KP66 663 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 Q6ZPA2 131 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 ZNF627Q7L945 461 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 D2HGDHQ8N465 521 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 CALML6Q8TD86 181 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 FOXB1Q99853 325 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 DNAJC28Q9NX36 388 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 IP6K2Q9UHH9 426 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 CTDP1Q9Y5B0 961 aaPredicted RBP5.92□□□□□ -1.46
SMC4-224ENST00000494612 DMRT1Q9Y5R6 373 aa5.92□□□□□ -1.46
SMC4-224ENST00000494612 ST20-MTHFSA0A0A6YYL1 179 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA12O60330 932 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 CDK17Q00537 523 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 SAFB2Q14151 953 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMC4-224ENST00000494612 ODF1Q14990 250 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PITRM1Q5JRX3 1037 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 FMNL3Q8IVF7 1028 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 AMOTL1Q8IY63 956 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 ULK2Q8IYT8 1036 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PPM1NQ8N819 430 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 TSR2Q969E8 191 aaKnown RBP5.91□□□□□ -1.46
SMC4-224ENST00000494612 TMEM176AQ96HP8 235 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 MPHOSPH9Q99550 1183 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 CCM2LQ9NUG4 571 aaPredicted RBP5.91□□□□□ -1.46
SMC4-224ENST00000494612 TCEAL9Q9UHQ7 104 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 LUC7L2Q9Y383 392 aaKnown RBP5.91□□□□□ -1.46
SMC4-224ENST00000494612 SH3BP1Q9Y3L3 701 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA9Q9Y5G4 932 aaKnown RBP5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA8Q9Y5G5 932 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA7Q9Y5G6 932 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA6Q9Y5G7 932 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA3Q9Y5H0 932 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 PCDHGA2Q9Y5H1 932 aa5.91□□□□□ -1.46
SMC4-224ENST00000494612 RAMP2O60895 175 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 PEX11BO96011 259 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 KRT4P19013 534 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 APEX1P27695 318 aaKnown RBP5.9□□□□□ -1.46
SMC4-224ENST00000494612 ADCY7P51828 1080 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 LGALS4P56470 323 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 RIN1Q13671 783 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 TRIM25Q14258 630 aaKnown RBP5.9□□□□□ -1.46
SMC4-224ENST00000494612 RRP1BQ14684 758 aaKnown RBP5.9□□□□□ -1.46
SMC4-224ENST00000494612 KIAA1841Q6NSI8 718 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 RABGGTAQ92696 567 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 ACAP3Q96P50 834 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 AGAP2Q99490 1192 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 KCTD10Q9H3F6 313 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 MTG2Q9H4K7 406 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 PARPBPQ9NWS1 579 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 USP36Q9P275 1121 aaKnown RBP5.9□□□□□ -1.46
SMC4-224ENST00000494612 DPP7Q9UHL4 492 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 FAM184BQ9ULE4 1060 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 NOB1Q9ULX3 412 aaKnown RBP5.9□□□□□ -1.46
SMC4-224ENST00000494612 VWA7Q9Y334 891 aa5.9□□□□□ -1.46
SMC4-224ENST00000494612 CAPN14A8MX76 684 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 K7ESF4 209 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 FZD9O00144 591 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 CYP27B1O15528 508 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 AKAP10O43572 662 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 SNUPNO95149 360 aaKnown RBP5.89□□□□□ -1.47
SMC4-224ENST00000494612 CFBP00751 764 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 ENPP1P22413 925 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 ANTXR2P58335 489 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 SLC25A3Q00325 362 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 FSCN1Q16658 493 aaKnown RBP5.89□□□□□ -1.47
SMC4-224ENST00000494612 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMC4-224ENST00000494612 WDR75Q8IWA0 830 aaKnown RBP5.89□□□□□ -1.47
SMC4-224ENST00000494612 RPGRQ92834 1020 aaKnown RBP5.89□□□□□ -1.47
SMC4-224ENST00000494612 CHMP4CQ96CF2 233 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
SMC4-224ENST00000494612 SLC2A4RGQ9NR83 387 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 MYPNQ86TC9 1320 aa5.89□□□□□ -1.47
SMC4-224ENST00000494612 KLHL33A6NCF5 533 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 CT47B1P0C2W7 299 aaPredicted RBP5.88□□□□□ -1.47
SMC4-224ENST00000494612 RBP3P10745 1247 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 EPHB1P54762 984 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 PPARAQ07869 468 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 ADAM15Q13444 863 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 LRCH2Q5VUJ6 765 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 KANSL1Q7Z3B3 1105 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 LPPQ93052 612 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 CLIP3Q96DZ5 547 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 PRRX2Q99811 253 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 DNAI1Q9UI46 699 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 ZNF180Q9UJW8 692 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 TMPRSS11EQ9UL52 423 aa5.88□□□□□ -1.47
SMC4-224ENST00000494612 ZSCAN20P17040 1043 aaPredicted RBP5.87□□□□□ -1.47
SMC4-224ENST00000494612 SCNN1GP51170 649 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 BCAR1P56945 870 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 ADAM8P78325 824 aa5.87□□□□□ -1.47
SMC4-224ENST00000494612 ATP2C1P98194 919 aaPredicted RBP5.87□□□□□ -1.47
SMC4-224ENST00000494612 ACAP1Q15027 740 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms