RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 INPPL1O15357 1258 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 GLUD1P00367 558 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 GCFC2P16383 781 aaKnown RBP10.73□□□□□ -0.69
UBR4-216ENST00000494503 GLUD2P49448 558 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 SCNN1GP51170 649 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 NUBP1P53384 320 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 TFDP1Q14186 410 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 KCNG4Q8TDN1 519 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 STAMQ92783 540 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 NAP1L4Q99733 375 aaKnown RBP10.73□□□□□ -0.69
UBR4-216ENST00000494503 TMEM175Q9BSA9 504 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 EIF2AQ9BY44 585 aaKnown RBP10.73□□□□□ -0.69
UBR4-216ENST00000494503 ZSWIM4Q9H7M6 989 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 KCNK12Q9HB15 430 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 BRMS1Q9HCU9 246 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 UBN1Q9NPG3 1134 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 GJB4Q9NTQ9 266 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 WRAP73Q9P2S5 460 aaPredicted RBP10.73□□□□□ -0.69
UBR4-216ENST00000494503 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 HES2Q9Y543 173 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 IPPQ9Y573 584 aa10.73□□□□□ -0.69
UBR4-216ENST00000494503 MYO15AQ9UKN7 3530 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 ARL5CA6NH57 179 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 M0R2N6 131 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 ZBTB39O15060 712 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 TEX28O15482 410 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 SOD2P04179 222 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 NCLP19338 710 aaKnown RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 EVCP57679 992 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 SCRN1Q12765 414 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 EPHA7Q15375 998 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 UBXN11Q5T124 520 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 PPP4R3AQ6IN85 833 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 B3GNT9Q6UX72 402 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 GET4Q7L5D6 327 aaPredicted RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 MAEAQ7L5Y9 396 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 ASCL5Q7RTU5 278 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 TAS1R1Q7RTX1 841 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 SLFN12Q8IYM2 578 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 ST13P5Q8NFI4 369 aaPredicted RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 SMG7Q92540 1137 aaKnown RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 RABGGTAQ92696 567 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 NKD2Q969F2 451 aaPredicted RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 B3GALT6Q96L58 329 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 SNX27Q96L92 541 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 ZFP42Q96MM3 310 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 MBOAT7Q96N66 472 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 RPS6KC1Q96S38 1066 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 PHF20Q9BVI0 1012 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
UBR4-216ENST00000494503 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 CA14Q9ULX7 337 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 DUSP12Q9UNI6 340 aa10.72□□□□□ -0.69
UBR4-216ENST00000494503 PRR23AA6NEV1 266 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 F8W810 466 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 ASAP2O43150 1006 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 NARSO43776 548 aaKnown RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 TSPAN1O60635 241 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 CLUHO75153 1309 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 RFPL2O75678 378 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 NPTXRO95502 500 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 LIG1P18858 919 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 AKAP5P24588 427 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 HOXA11P31270 313 aaPredicted RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 KRT2P35908 639 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 CLCN5P51795 746 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 MXD4Q14582 209 aaPredicted RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 NPY5RQ15761 445 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 CALCRLQ16602 461 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 SPECC1Q5M775 1068 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 CWF19L1Q69YN2 538 aaKnown RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 C15orf39Q6ZRI6 1047 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 MRPL10Q7Z7H8 261 aaKnown RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 C4orf19Q8IY42 314 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 SMG8Q8ND04 991 aaKnown RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 HASPINQ8TF76 798 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 RSAD2Q8WXG1 361 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 WASF1Q92558 559 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 HINFPQ9BQA5 517 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 COLEC11Q9BWP8 271 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 RNF39Q9H2S5 420 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 NXF3Q9H4D5 531 aaKnown RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 MARCH5Q9NX47 278 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 KLK14Q9P0G3 267 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 ORC3Q9UBD5 711 aaPredicted RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 MTCL1Q9Y4B5 1905 aaKnown RBP10.71□□□□□ -0.69
UBR4-216ENST00000494503 PPME1Q9Y570 386 aa10.71□□□□□ -0.69
UBR4-216ENST00000494503 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 LRRIQ4A6NIV6 560 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms