RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 MCM3APO60318 1980 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 LAMA4Q16363 1823 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 PLEKHA8P1O95397 391 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SLFN14P0C7P3 912 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SUPT20HL2P0C7V6 817 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 CALM1P0DP23 149 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 CALM2P0DP24 149 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 CALM3P0DP25 149 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 ACRP10323 421 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 CCL23P55773 120 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 PTPN11Q06124 597 aaPredicted RBP9.3□□□□□ -0.92
RIF1-211ENST00000494333 PPIGQ13427 754 aaKnown RBP eCLIP9.3□□□□□ -0.925e-7■□□□□ 10.8
RIF1-211ENST00000494333 PGM5Q15124 567 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SYNE3Q6ZMZ3 975 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 VSIG10LQ86VR7 867 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 RAB11FIP4Q86YS3 637 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 RELL1Q8IUW5 271 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SRBD1Q8N5C6 995 aaKnown RBP9.3□□□□□ -0.92
RIF1-211ENST00000494333 FANCBQ8NB91 859 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 PHC3Q8NDX5 983 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 PPP1R13LQ8WUF5 828 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SPZ1Q9BXG8 430 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 TRMT13Q9NUP7 481 aaKnown RBP9.3□□□□□ -0.92
RIF1-211ENST00000494333 MTMR10Q9NXD2 777 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
RIF1-211ENST00000494333 AP4E1Q9UPM8 1137 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 PCDHGC5Q9Y5F6 944 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 UMODL1Q5DID0 1318 aa9.3□□□□□ -0.92
RIF1-211ENST00000494333 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 MMP3P08254 477 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 CYP2C9P11712 490 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 CASTP20810 708 aaKnown RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 ZNF76P36508 570 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 FANCCQ00597 558 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 EXOSC10Q01780 885 aaKnown RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 ARHGAP1Q07960 439 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 ADCK5Q3MIX3 580 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 TMEM240Q5SV17 173 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 FAM109BQ6ICB4 259 aaPredicted RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 USP17L6PQ6QN14 398 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 ZNF365Q70YC5 407 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 SGMS1Q86VZ5 419 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
RIF1-211ENST00000494333 IL31RAQ8NI17 732 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 SMARCC2Q8TAQ2 1214 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 GAL3ST3Q96A11 431 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 MYRFLQ96LU7 910 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 TCEANC2Q96MN5 208 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 TMEM74Q96NL1 305 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 GGT7Q9UJ14 662 aa9.29□□□□□ -0.92
RIF1-211ENST00000494333 hCG_1642624A0A1W2PR95 340 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 TMPRSS2O15393 492 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 GAS2O43903 313 aaKnown RBP9.28□□□□□ -0.92
RIF1-211ENST00000494333 FGBP02675 491 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 TGFB3P10600 412 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 CCND2P30279 289 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 GBP2P32456 591 aaPredicted RBP9.28□□□□□ -0.92
RIF1-211ENST00000494333 SP2Q02086 613 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 ID3Q02535 119 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 SEPT6Q14141 434 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 DGKDQ16760 1214 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 NFRKBQ6P4R8 1299 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 KCNV1Q6PIU1 500 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 HS2ST1Q7LGA3 356 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 MICU3Q86XE3 530 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 CUL5Q93034 780 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 SEMA6BQ9H3T3 888 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 IL23AQ9NPF7 189 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 KBTBD4Q9NVX7 518 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 CRIM1Q9NZV1 1036 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 PCDHA4Q9UN74 947 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 ACTL7BQ9Y614 415 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 LAMA3Q16787 3333 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 LCTP09848 1927 aa9.28□□□□□ -0.92
RIF1-211ENST00000494333 DNAH12Q6ZR08 3092 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 MEIS2O14770 477 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 PPFIA4O75335 1185 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 GGPS1O95749 300 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 MRPS9P82933 396 aaKnown RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 PWP1Q13610 501 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 KRT32Q14532 448 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 HSDL1Q3SXM5 330 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 SGO2Q562F6 1265 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 CELF3Q5SZQ8 465 aaKnown RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 PSRC1Q6PGN9 363 aaPredicted RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 APOA5Q6Q788 366 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 TMTC3Q6ZXV5 915 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 OTOP2Q7RTS6 562 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 RPUSD2Q8IZ73 545 aaKnown RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 PPTC7Q8NI37 304 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 KAT2BQ92831 832 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms