RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 A0A1B0GUA9 196 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 CLDN3O15551 220 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 CALUO43852 315 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 PPP1R37O75864 691 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 NPTXRO95502 500 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 PIGRP01833 764 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 HARSP12081 509 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 SARSP49591 514 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 CASP5P51878 434 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 SNRPFP62306 86 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 NOLC1Q14978 699 aaKnown RBP eCLIP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 KYAT1Q16773 422 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 ISM2Q6H9L7 571 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 ARMCX5Q6P1M9 558 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 MPZL3Q6UWV2 235 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 SLC24A5Q71RS6 500 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 EPM2AIP1Q7L775 607 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 TAS1R3Q7RTX0 852 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 ZBTB33Q86T24 672 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 GUF1Q8N442 669 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 RNF169Q8NCN4 708 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 KIAA0895Q8NCT3 520 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 ZNF507Q8TCN5 953 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 POMGNT1Q8WZA1 660 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 HERVK_113Q902F9 699 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 PGBD4Q96DM1 585 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 ACO2Q99798 780 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 TSG101Q99816 390 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.081e-12■■□□□ 12.6
VEGFA-214ENST00000493786 MSTO1Q9BUK6 570 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 STRA6Q9BX79 667 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 FGFBP2Q9BYJ0 223 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 GBP3Q9H0R5 595 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 TMX1Q9H3N1 280 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 PDZD7Q9H5P4 517 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 CGNQ9P2M7 1197 aaKnown RBP8.32□□□□□ -1.08
VEGFA-214ENST00000493786 GDAQ9Y2T3 454 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 PCDHB7Q9Y5E2 793 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 SLC4A7Q9Y6M7 1214 aa8.32□□□□□ -1.08
VEGFA-214ENST00000493786 MYH11P35749 1972 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 A0A0U1RQF3 1178 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 BICDL2A1A5D9 508 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 ENPP3O14638 875 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 KIAA0391O15091 583 aaKnown RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 HOXA2O43364 376 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 MGEA5O60502 916 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 MCF2P10911 925 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 ITGA4P13612 1032 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 HOXA11P31270 313 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 YARSP54577 528 aaKnown RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 EPHB4P54760 987 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 WDR5P61964 334 aaKnown RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 MORC3Q14149 939 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 DSC3Q14574 896 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 KLHL10Q6JEL2 608 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 CDR2LQ86X02 465 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 SMYD4Q8IYR2 804 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 ABI1Q8IZP0 508 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 MLKLQ8NB16 471 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 NOC3LQ8WTT2 800 aaKnown RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 SCFD1Q8WVM8 642 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 SLC9A7Q96T83 725 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 GDF15Q99988 308 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 ZBED2Q9BTP6 218 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 CCDC94Q9BW85 323 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 APOL6Q9BWW8 343 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 OSBPL7Q9BZF2 842 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 UBN1Q9NPG3 1134 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 TOPORSQ9NS56 1045 aaPredicted RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 FAM105AQ9NUU6 356 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 TYW1Q9NV66 732 aaKnown RBP8.31□□□□□ -1.08
VEGFA-214ENST00000493786 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 PARP2Q9UGN5 583 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 MAPK8IP1Q9UQF2 711 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 PCDHB2Q9Y5E7 798 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
VEGFA-214ENST00000493786 TTLL13PA6NNM8 815 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 C9IYK1 514 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 PDXKO00764 312 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 UPP2O95045 317 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 EOMESO95936 686 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 LDHAP00338 332 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 CCDC192P0DO97 292 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 ATP2A2P16615 1042 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 GARTP22102 1010 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 RPL13P26373 211 aaKnown RBP8.3□□□□□ -1.08
VEGFA-214ENST00000493786 BMP8BP34820 402 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 PRCPP42785 496 aa8.3□□□□□ -1.08
VEGFA-214ENST00000493786 NLRP12P59046 1061 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms