RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 NLRP11P59045 1033 aaKnown RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 PPP2R3AQ06190 1150 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 MTFR1Q15390 333 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 CCDC40Q4G0X9 1142 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 VWA3BQ502W6 1294 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 ARMCX5Q6P1M9 558 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 TSHZ1Q6ZSZ6 1077 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 FAM186BQ8IYM0 893 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 NME8Q8N427 588 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 ARRDC4Q8NCT1 418 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 ZSWIM2Q8NEG5 633 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 SLC35C1Q96A29 364 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 ERGIC2Q96RQ1 377 aa13.83□□□□□ -0.2
VPS52-220ENST00000493674 TARS2Q9BW92 718 aaKnown RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 PRMT7Q9NVM4 692 aaPredicted RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 ARMCX3Q9UH62 379 aaPredicted RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 TNRC18O15417 2968 aaPredicted RBP13.83□□□□□ -0.2
VPS52-220ENST00000493674 MICAL3Q7RTP6 2002 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 A0A0B4J269 797 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 DNM1LO00429 736 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 EXOC3O60645 756 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 TOM1L1O75674 476 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
VPS52-220ENST00000493674 LIG4P49917 911 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 TBX2Q13207 712 aaPredicted RBP13.82□□□□□ -0.2
VPS52-220ENST00000493674 PCBP1Q15365 356 aaKnown RBP eCLIP13.82□□□□□ -0.2
VPS52-220ENST00000493674 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 WNT8BQ93098 351 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 NOC4LQ9BVI4 516 aaKnown RBP13.82□□□□□ -0.2
VPS52-220ENST00000493674 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 FAM49AQ9H0Q0 323 aaPredicted RBP13.82□□□□□ -0.2
VPS52-220ENST00000493674 NDST4Q9H3R1 872 aa13.82□□□□□ -0.2
VPS52-220ENST00000493674 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 EXTL3O43909 919 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 DARSP14868 501 aaKnown RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 RGS19P49795 217 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 MCL1Q07820 350 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 BFSP1Q12934 665 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 ITGA7Q13683 1181 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 NLRP7Q8WX94 980 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 POMGNT1Q8WZA1 660 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 BICD1Q96G01 975 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 ZBTB45Q96K62 511 aaPredicted RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 MFSD14AQ96MC6 490 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 GLT1D1Q96MS3 346 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 SEZ6LQ9BYH1 1024 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
VPS52-220ENST00000493674 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 CDHR5Q9HBB8 845 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 TNFSF13BQ9Y275 285 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 SIK3Q9Y2K2 1263 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
VPS52-220ENST00000493674 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPS52-220ENST00000493674 B4GALT5O43286 388 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 TSPAN1O60635 241 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 CAPN15O75808 1086 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 TPM2P07951 284 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 MNX1P50219 401 aaPredicted RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 CRYBB1P53674 252 aaPredicted RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 MRPS6P82932 125 aaKnown RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 UBXN1Q04323 297 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 MGAT3Q09327 533 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 PRPF4BQ13523 1007 aaKnown RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 KIZQ2M2Z5 673 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 C1orf220Q5T0J3 134 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 ATF7IP2Q5U623 682 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 SPECC1LQ69YQ0 1117 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 MPZL3Q6UWV2 235 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 TMC6Q7Z403 805 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 TMC2Q8TDI7 906 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 DEFB118Q96PH6 123 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 KIAA1586Q9HCI6 787 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 AGO2Q9UKV8 859 aaKnown RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 LTBP2Q14767 1821 aa13.8□□□□□ -0.2
VPS52-220ENST00000493674 MKI67P46013 3256 aaKnown RBP13.8□□□□□ -0.2
VPS52-220ENST00000493674 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 KBTBD13C9JR72 458 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 PMM2O15305 246 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms