RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-223ENST00000493618 ARL5CA6NH57 179 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 NRP1O14786 923 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 NPTXRO95502 500 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 ALDH2P05091 517 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 AXLP30530 894 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 SCNN1GP51170 649 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
ATG4B-223ENST00000493618 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
ATG4B-223ENST00000493618 HFE2Q6ZVN8 426 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-223ENST00000493618 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 CNNM3Q8NE01 707 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 FEZF2Q8TBJ5 459 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 ZFP42Q96MM3 310 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 POLR3CQ9BUI4 534 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-223ENST00000493618 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-223ENST00000493618 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 SH2B1Q9NRF2 756 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-223ENST00000493618 KANSL3Q9P2N6 904 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 TRIP11Q15643 1979 aa16.25■□□□□ 0.19
ATG4B-223ENST00000493618 MYO10Q9HD67 2058 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 F8W810 466 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 C2CD2LO14523 706 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATG4B-223ENST00000493618 HOXB8P17481 243 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-223ENST00000493618 LIG1P18858 919 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 AKAP5P24588 427 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 OR1G1P47890 313 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
ATG4B-223ENST00000493618 POU5F1BQ06416 359 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 ERMNQ8TAM6 284 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 SLC22A17Q8WUG5 538 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 BSNDQ8WZ55 320 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 EDAQ92838 391 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 CCDC51Q96ER9 411 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 TMEM175Q9BSA9 504 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 POMKQ9H5K3 350 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 UBN1Q9NPG3 1134 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 MARCH5Q9NX47 278 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 KLK14Q9P0G3 267 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 DBR1Q9UK59 544 aaKnown RBP16.24■□□□□ 0.19
ATG4B-223ENST00000493618 USP20Q9Y2K6 914 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 KMT2EQ8IZD2 1858 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 TECTAO75443 2155 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 MYH11P35749 1972 aa16.24■□□□□ 0.19
ATG4B-223ENST00000493618 MTCL1Q9Y4B5 1905 aaKnown RBP16.23■□□□□ 0.19
ATG4B-223ENST00000493618 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 CCT6AP40227 531 aaKnown RBP16.23■□□□□ 0.19
ATG4B-223ENST00000493618 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.19
ATG4B-223ENST00000493618 ECM1Q16610 540 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 CES5AQ6NT32 575 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 TAS1R1Q7RTX1 841 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 COLGALT2Q8IYK4 626 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 C4orf32Q8N8J7 132 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 NFKBIZQ9BYH8 718 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 ADAM7Q9H2U9 754 aa16.23■□□□□ 0.19
ATG4B-223ENST00000493618 NOL7Q9UMY1 257 aaKnown RBP16.23■□□□□ 0.19
ATG4B-223ENST00000493618 CARNS1A5YM72 827 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 TTLL13PA6NNM8 815 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 RPA1P27694 616 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 ZXDAP98168 799 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 ORC2Q13416 577 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-223ENST00000493618 GIT2Q14161 759 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 SLC27A1Q6PCB7 646 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 MCPH1Q8NEM0 835 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 RABGGTAQ92696 567 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 KLHL5Q96PQ7 755 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 CACNG4Q9UBN1 327 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 PARP2Q9UGN5 583 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 IRAK3Q9Y616 596 aa16.22■□□□□ 0.19
ATG4B-223ENST00000493618 WDFY4Q6ZS81 3184 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 TMEM221A6NGB7 291 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 C2CD4DB7Z1M9 353 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 M0R296 226 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 EDN1P05305 212 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 CNPP09543 421 aaKnown RBP16.21■□□□□ 0.19
ATG4B-223ENST00000493618 MYBP10242 640 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 KLRC2P26717 231 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 TOB1P50616 345 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-223ENST00000493618 ITIH3Q06033 890 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 TMC5Q6UXY8 1006 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 TRIM67Q6ZTA4 783 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 ZBTB8OSQ8IWT0 167 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 KIFC3Q9BVG8 833 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 HERC2P3Q9BVR0 1158 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 EMILIN2Q9BXX0 1053 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 MRPL17Q9NRX2 175 aaKnown RBP16.21■□□□□ 0.19
ATG4B-223ENST00000493618 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-223ENST00000493618 DZANK1Q9NVP4 752 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 LRWD1Q9UFC0 647 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
ATG4B-223ENST00000493618 A0A1B0GUA9 196 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 PP2D1A8MPX8 630 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms