RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 ANKRD34BA5PLL1 514 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 H0YGN5 161 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 MAKP20794 623 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 TUBA3CQ13748 450 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 PKN2Q16513 984 aaKnown RBP5.59□□□□□ -1.51
CLIP4-212ENST00000493551 PARP10Q53GL7 1025 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 TUBA3EQ6PEY2 450 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 Q6ZSN1 163 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 OTOP1Q7RTM1 612 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 POLNQ7Z5Q5 900 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 IL17DQ8TAD2 202 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 TBC1D16Q8TBP0 767 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 FRS2Q8WU20 508 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 LARP4BQ92615 738 aaKnown RBP5.59□□□□□ -1.51
CLIP4-212ENST00000493551 DPF2Q92785 391 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 CRBNQ96SW2 442 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 AGAP2Q99490 1192 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 CYP26B1Q9NR63 512 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 APEX2Q9UBZ4 518 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 TSPYL4Q9UJ04 414 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 NUDCQ9Y266 331 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 LAS1LQ9Y4W2 734 aaKnown RBP5.59□□□□□ -1.51
CLIP4-212ENST00000493551 SLC30A1Q9Y6M5 507 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 PAPPA2Q9BXP8 1791 aa5.59□□□□□ -1.51
CLIP4-212ENST00000493551 KNG1P01042 644 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 RPS12P25398 132 aaKnown RBP5.58□□□□□ -1.52
CLIP4-212ENST00000493551 ACRV1P26436 265 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 RAC3P60763 192 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 TCIRG1Q13488 830 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 SLC4A8Q2Y0W8 1093 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 SLC10A5Q5PT55 438 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 VASNQ6EMK4 673 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 DTX3Q8N9I9 347 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 SLC17A8Q8NDX2 589 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 BVESQ8NE79 360 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 PHOSPHO1Q8TCT1 267 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
CLIP4-212ENST00000493551 DIO2Q92813 273 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 KATNBL1Q9H079 304 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 VPS33BQ9H267 617 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 MMRN2Q9H8L6 949 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 MYOZ2Q9NPC6 264 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 MYOTQ9UBF9 498 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 TIMELESSQ9UNS1 1208 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 DMRT1Q9Y5R6 373 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 SCN9AQ15858 1988 aa5.58□□□□□ -1.52
CLIP4-212ENST00000493551 KDM3BQ7LBC6 1761 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 H7BY64 318 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 FBXO21O94952 628 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 VIL1P09327 827 aaKnown RBP5.57□□□□□ -1.52
CLIP4-212ENST00000493551 PPP2R1AP30153 589 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 SREBF2Q12772 1141 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 KCNAB2Q13303 367 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 MRPL58Q14197 206 aaKnown RBP5.57□□□□□ -1.52
CLIP4-212ENST00000493551 FNDC7Q5VTL7 733 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 GTF2IRD2BQ6EKJ0 949 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 PCSK4Q6UW60 755 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 GTF2IRD2Q86UP8 949 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 PROSER1Q86XN7 944 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 EYA3Q99504 573 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 NKX2-4Q9H2Z4 354 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 RBPJLQ9UBG7 517 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 PCDHAC2Q9Y5I4 1007 aa5.57□□□□□ -1.52
CLIP4-212ENST00000493551 A0A1W2PQH9 124 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 CLRN2A0PK11 232 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 NOP56O00567 594 aaKnown RBP5.56□□□□□ -1.52
CLIP4-212ENST00000493551 MAFKO60675 156 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 ERCC3P19447 782 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 NF2P35240 595 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF280AP59817 542 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-212ENST00000493551 CRHR2Q13324 411 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 USP10Q14694 798 aaKnown RBP5.56□□□□□ -1.52
CLIP4-212ENST00000493551 PHF19Q5T6S3 580 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 MAMDC4Q6UXC1 1216 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 CCDC81Q6ZN84 652 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 LRP10Q7Z4F1 713 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 CCDC103Q8IW40 242 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 TTLL11Q8NHH1 800 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 PNISRQ8TF01 805 aaKnown RBP5.56□□□□□ -1.52
CLIP4-212ENST00000493551 SH3TC2Q8TF17 1288 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 PRRX2Q99811 253 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 CHPF2Q9P2E5 772 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 OAZ3Q9UMX2 235 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 PTCH2Q9Y6C5 1203 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 LRRC37AA6NMS7 1700 aa5.56□□□□□ -1.52
CLIP4-212ENST00000493551 DDX60Q8IY21 1712 aaKnown RBP5.56□□□□□ -1.52
CLIP4-212ENST00000493551 ANKRD36CQ5JPF3 1778 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 MAPK8IP3Q9UPT6 1336 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 DLG5Q8TDM6 1919 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 DGKIO75912 1065 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 NAT2P11245 290 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 CR2P20023 1033 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 KLRK1P26718 216 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 TM4SF4P48230 202 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 RPS8P62241 208 aaKnown RBP5.55□□□□□ -1.52
CLIP4-212ENST00000493551 FKBP1BP68106 108 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 CYP4F3Q08477 520 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 COL9A2Q14055 689 aaPredicted RBP5.55□□□□□ -1.52
CLIP4-212ENST00000493551 NFE2L2Q16236 605 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms