RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 RPUSD2Q8IZ73 545 aaKnown RBP20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 EPS8L1Q8TE68 723 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 NSUN6Q8TEA1 469 aaKnown RBP20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 BSNDQ8WZ55 320 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 KIFAP3Q92845 792 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 ARL8AQ96BM9 186 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 SAAL1Q96ER3 474 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 CEP170P1Q96L14 293 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 FBXL18Q96ME1 805 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 KREMEN1Q96MU8 473 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 CARD9Q9H257 536 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 SLITRK6Q9H5Y7 841 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 KMT5AQ9NQR1 393 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 COQ4Q9Y3A0 265 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 WDR81Q562E7 1941 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 PFASO15067 1338 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 FZD9O00144 591 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 HMGCS2P54868 508 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 CFAP58Q5T655 872 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 KRT39Q6A163 491 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 SLC39A4Q6P5W5 647 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 SEMA4DQ92854 862 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 ATP6V0A1Q93050 837 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 PDLIM7Q9NR12 457 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 PICK1Q9NRD5 415 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 AMACRQ9UHK6 382 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 GJA3Q9Y6H8 435 aa20.39■□□□□ 0.85
TSC22D4-205ENST00000493217 FAM170AA1A519 330 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 SGPL1O95470 568 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 FGGP02679 453 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 HSPA9P38646 679 aaKnown RBP20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 SOX10P56693 466 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 POU5F1Q01860 360 aaKnown RBP20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 TMEM132BQ14DG7 1078 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 CD302Q8IX05 232 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 NOCTQ9UK39 431 aaKnown RBP20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 KIAA1217Q5T5P2 1943 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 ZNF233A6NK53 670 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 KRT14P02533 472 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 IVLP07476 585 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 CHRNB2P17787 502 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 MAATS1Q7Z4T9 603 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 NOP9Q86U38 636 aaKnown RBP20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 PPM1KQ8N3J5 372 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 SHC3Q92529 594 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 CCDC127Q96BQ5 260 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 MFSD14AQ96MC6 490 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 PCDHB18PQ96TA0 734 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 TMEM8AQ9HCN3 771 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 CWC15Q9P013 229 aaKnown RBP20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 FZD1Q9UP38 647 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 TELO2Q9Y4R8 837 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 ALG6Q9Y672 507 aa20.38■□□□□ 0.85
TSC22D4-205ENST00000493217 C19orf81C9J6K1 198 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 ATP2A1O14983 1001 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 DKC1O60832 514 aaKnown RBP eCLIP20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 RTN2O75298 545 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 GZMAP12544 262 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 USP8P40818 1118 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 GPC3P51654 580 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 GPC5P78333 572 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 PRAMEF18Q5VWM3 479 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 SWSAP1Q6NVH7 229 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 PROCA1Q8NCQ7 364 aaPredicted RBP20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 CCDC26Q8TAB7 109 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 TMC2Q8TDI7 906 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 PHIPQ8WWQ0 1821 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 SEC14L1Q92503 715 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 POP1Q99575 1024 aaKnown RBP20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 CYP39A1Q9NYL5 469 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 NR2E1Q9Y466 385 aa20.37■□□□□ 0.85
TSC22D4-205ENST00000493217 NFASCO94856 1347 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 ADGRA3Q8IWK6 1321 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 DGAT1O75907 488 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 PSAPP07602 524 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 MFAP3P55082 362 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 HLTFQ14527 1009 aaKnown RBP eCLIP20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 C11orf63Q6NUN7 778 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 DDX42Q86XP3 938 aaKnown RBP eCLIP20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 HELQQ8TDG4 1101 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 LTBP3Q9NS15 1303 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 CYP26A1O43174 497 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 RTP1P59025 263 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 PRPF4BQ13523 1007 aaKnown RBP20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 SLC47A2Q86VL8 602 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 CCDC60Q8IWA6 550 aaPredicted RBP20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 ALG3Q92685 438 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 CDHR1Q96JP9 859 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 JPH1Q9HDC5 661 aaPredicted RBP20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 ACP6Q9NPH0 428 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 XPNPEP1Q9NQW7 623 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.36■□□□□ 0.851e-6■■■■■ 57.7
TSC22D4-205ENST00000493217 CTTNBP2NLQ9P2B4 639 aa20.36■□□□□ 0.85
TSC22D4-205ENST00000493217 TTI1O43156 1089 aa20.35■□□□□ 0.85
TSC22D4-205ENST00000493217 CATSPERGQ6ZRH7 1159 aa20.35■□□□□ 0.85
TSC22D4-205ENST00000493217 FBXL13Q8NEE6 735 aa20.35■□□□□ 0.85
TSC22D4-205ENST00000493217 MCPH1Q8NEM0 835 aa20.35■□□□□ 0.85
TSC22D4-205ENST00000493217 POMGNT1Q8WZA1 660 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms