RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 SSBP05455 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 SRGAP2CP0DJJ0 459 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 HOXB8P17481 243 aaPredicted RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 MUTP22033 750 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 HOXA11P31270 313 aaPredicted RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 ALDH7A1P49419 539 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 AFF1P51825 1210 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 NHLH1Q02575 133 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 FAM173BQ6P4H8 233 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 CATSPER4Q7RTX7 472 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 MCPH1Q8NEM0 835 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 PRPF31Q8WWY3 499 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 VN1R3Q9BXE9 311 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 ZBP1Q9H171 429 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 POLR3FQ9H1D9 316 aaPredicted RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 NRDE2Q9H7Z3 1164 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 AGPAT5Q9NUQ2 364 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 TBC1D13Q9NVG8 400 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 PIN4Q9Y237 131 aaKnown RBP16.25■□□□□ 0.19
SS18L1-205ENST00000492466 IRAK3Q9Y616 596 aa16.25■□□□□ 0.19
SS18L1-205ENST00000492466 TMEM221A6NGB7 291 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 M0R296 226 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 GALTP07902 379 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
SS18L1-205ENST00000492466 CDC25AP30304 524 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 TXLNAP40222 546 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 UBA7P41226 1012 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 LAMTOR4Q0VGL1 99 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 MXD4Q14582 209 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-205ENST00000492466 STK38Q15208 465 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-205ENST00000492466 UBXN11Q5T124 520 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-205ENST00000492466 AGMOQ6ZNB7 445 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 MRPL10Q7Z7H8 261 aaKnown RBP16.24■□□□□ 0.19
SS18L1-205ENST00000492466 CABP7Q86V35 215 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 RNF149Q8NC42 400 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 RSPH1Q8WYR4 309 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 CASP10Q92851 521 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 ASIC4Q96FT7 647 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 CALML4Q96GE6 196 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 IGSF21Q96ID5 467 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 AK8Q96MA6 479 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 NT5C3AQ9H0P0 336 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 BHMT2Q9H2M3 363 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 DNAJB4Q9UDY4 337 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 DNM3Q9UQ16 869 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 CFAP54Q96N23 3096 aa16.24■□□□□ 0.19
SS18L1-205ENST00000492466 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 ASAP2O43150 1006 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 ZC3H11AO75152 810 aaKnown RBP eCLIP16.23■□□□□ 0.19
SS18L1-205ENST00000492466 ERLIN2O94905 339 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 CXCL14O95715 111 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 SRGAP2BP0DMP2 458 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 SKIP12755 728 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 IL17AQ16552 155 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 TMEM132AQ24JP5 1023 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 NOMO2Q5JPE7 1267 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 IER5LQ5T953 404 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 DDX53Q86TM3 631 aaKnown RBP16.23■□□□□ 0.19
SS18L1-205ENST00000492466 ALYREFQ86V81 257 aaKnown RBP16.23■□□□□ 0.19
SS18L1-205ENST00000492466 ZNF280BQ86YH2 543 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 PLIN2Q99541 437 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 ADAM7Q9H2U9 754 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 PCDHB2Q9Y5E7 798 aa16.23■□□□□ 0.19
SS18L1-205ENST00000492466 DDHD2O94830 711 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
SS18L1-205ENST00000492466 CTSAP10619 480 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 MARCKSP29966 332 aaPredicted RBP16.22■□□□□ 0.19
SS18L1-205ENST00000492466 LONP1P36776 959 aaKnown RBP16.22■□□□□ 0.19
SS18L1-205ENST00000492466 RAB27AP51159 221 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 GLB1LQ6UWU2 654 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 SLC22A17Q8WUG5 538 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 PBXIP1Q96AQ6 731 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 TMEM169Q96HH4 297 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 POMKQ9H5K3 350 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 XPNPEP1Q9NQW7 623 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 MYO10Q9HD67 2058 aa16.22■□□□□ 0.19
SS18L1-205ENST00000492466 E9PMD0 336 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 INO80B-WBP1J3KQ70 363 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 F13A1P00488 732 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 SLC11A1P49279 550 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 SIGLEC14Q08ET2 396 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 NCBP1Q09161 790 aaKnown RBP16.21■□□□□ 0.19
SS18L1-205ENST00000492466 ECM1Q16610 540 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 SRGAP1Q7Z6B7 1085 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 ZBTB8OSQ8IWT0 167 aa16.21■□□□□ 0.19
SS18L1-205ENST00000492466 PRSS33Q8NF86 280 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms