RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 NLRX1Q86UT6 975 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 HOOK3Q86VS8 718 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CDR2LQ86X02 465 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ERP44Q9BS26 406 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SUCLA2Q9P2R7 463 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CTNNAL1Q9UBT7 734 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RASGRF2O14827 1237 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SWSAP1Q6NVH7 229 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KDM7AQ6ZMT4 941 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SH3GL2Q99962 352 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 A0A1B0GUL6 1792 aa16.33■□□□□ 0.2
TNFRSF1B-203ENST00000492361 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 THAP12O43422 761 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ATP9AO75110 1047 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ITGB3BPQ13352 177 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KYNUQ16719 465 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 Q4G0T1 1027 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ZBTB33Q86T24 672 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 NT5C1BQ96P26 610 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ANKRD63C9JTQ0 380 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 NOP9Q86U38 636 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SEC16BQ96JE7 1060 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 WDR91A4D1P6 747 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 HSPA9P38646 679 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RPL21P46778 160 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PPATQ06203 517 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DMP1Q13316 513 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 UGCGQ16739 394 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DCAF12L1Q5VU92 463 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RNF207Q6ZRF8 634 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ACTRT1Q8TDG2 376 aa16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DDX20Q9UHI6 824 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PSMD10O75832 226 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PSMC4P43686 418 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RPS6P62753 249 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SMAD1Q15797 465 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SNRNP35Q16560 246 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 COBLL1Q53SF7 1204 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SRRM1Q8IYB3 904 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TMEM143Q96AN5 459 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 COL20A1Q9P218 1284 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 LRP5O75197 1615 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ERFP50548 548 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 NUGGCQ68CJ6 796 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PCDHB18PQ96TA0 734 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PLCD4Q9BRC7 762 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TMEM253P0C7T8 217 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MARK3P27448 753 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 LIG4P49917 911 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ITIH3Q06033 890 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KIF2BQ8N4N8 673 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 GIMAP7Q8NHV1 300 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CNKSR1Q969H4 720 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TBX3O15119 743 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SPAG7O75391 227 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ECEL1O95672 775 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CREB1P16220 341 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 HYIQ5T013 277 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 FAM107AO95990 144 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 P4HBP07237 508 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 ADRB2P07550 413 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MFAP3P55082 362 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 BAATQ14032 418 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 RASA3Q14644 834 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 WDR44Q5JSH3 913 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CCDC13Q8IYE1 715 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 DOCK2Q92608 1830 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SLC16A3O15427 465 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CD19P15391 556 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 CNGA1P29973 690 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 NT5C2P49902 561 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 KRT17Q04695 432 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MTMR2Q13614 643 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SEPT7Q16181 437 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 MXRA8Q9BRK3 442 aa16.3■□□□□ 0.2
TNFRSF1B-203ENST00000492361 SLITRK6Q9H5Y7 841 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms