RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 ZC3H3Q8IXZ2 948 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ANKRD35Q8N283 1001 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 NME8Q8N427 588 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 WDR66Q8TBY9 1149 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 U2AF1L4Q8WU68 220 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 RAD54LQ92698 747 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 STMN2Q93045 179 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 HIC2Q96JB3 615 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CRAMP1Q96RY5 1269 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 BRIP1Q9BX63 1249 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ZFP69BQ9UJL9 534 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PPP1R9AQ9ULJ8 1098 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PHTF1Q9UMS5 762 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 UMODL1Q5DID0 1318 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PCDH11YQ9BZA8 1340 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 FAM47DPA6NHR8 397 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 MIF4GDA9UHW6 222 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 DDX3XO00571 662 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC22O60826 627 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ECEL1O95672 775 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PLCG2P16885 1265 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 LMNB1P20700 586 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CYP7A1P22680 504 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 CTSWP56202 376 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 USP46P62068 366 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 DEUP1Q05D60 604 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 NONOQ15233 471 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 Q4G0T1 1027 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PHLDB3Q6NSJ2 640 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 DPY19L2P1Q6NXN4 242 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 MARK2Q7KZI7 788 aaKnown RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 RNF168Q8IYW5 571 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ST13P4Q8IZP2 240 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 UBL4BQ8N7F7 174 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PRELID2Q8N945 189 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 SLC35G2Q8TBE7 412 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 DDX12PQ92771 950 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
CCDC6-202ENST00000491922 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 LRP2BPQ9P2M1 347 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 ANGPTL2Q9UKU9 493 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 TBC1D30Q9Y2I9 924 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 LAMB1P07942 1786 aa6.89□□□□□ -1.31
CCDC6-202ENST00000491922 A0A1B0GUL6 1792 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CDH16O75309 829 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 KRT36O76013 467 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CBX6O95503 412 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ACSL3O95573 720 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ASLP04424 464 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CYP1A1P04798 512 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 UBTFL6P0CB48 400 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ACTN1P12814 892 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CD151P48509 253 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 RTP1P59025 263 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 COASYQ13057 564 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 PABPC4Q13310 644 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ZNF211Q13398 564 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CYP1B1Q16678 543 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 TMEM266Q2M3C6 531 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 LETM2Q2VYF4 491 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 WDR72Q3MJ13 1102 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ZC2HC1CQ53FD0 456 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 TAF1BQ53T94 588 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 FAM26FQ5R3K3 315 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 RFWD3Q6PCD5 774 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 EPM2AIP1Q7L775 607 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 DNAAF5Q86Y56 855 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 RBM46Q8TBY0 533 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ZNF398Q8TD17 642 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 C10orf82Q8WW14 230 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 BTBD10Q9BSF8 475 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 RAB34Q9BZG1 259 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 BARHL2Q9NY43 387 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 NDUFA13Q9P0J0 144 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 WHRNQ9P202 907 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 HDAC9Q9UKV0 1011 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 COL1A1P02452 1464 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 KCPQ6ZWJ8 1503 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 PAPPAQ13219 1627 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 TRPM3Q9HCF6 1732 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 A8MXQ7 604 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 C2CD2LO14523 706 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ATP9BO43861 1147 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 EDF1O60869 148 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 TBX10O75333 385 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 TTC4O95801 387 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 PABPC4LP0CB38 370 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 SLC9A1P19634 815 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 MUTP22033 750 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 IGHMBP2P38935 993 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 FXR2P51116 673 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 INHBCP55103 352 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 JAM2P57087 298 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms