RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 POLD4Q9HCU8 107 aa13.13□□□□□ -0.31
PTPN7-214ENST00000491584 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
PTPN7-214ENST00000491584 RMND1Q9NWS8 449 aa13.13□□□□□ -0.31
PTPN7-214ENST00000491584 INSL6Q9Y581 213 aa13.13□□□□□ -0.31
PTPN7-214ENST00000491584 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
PTPN7-214ENST00000491584 TET1Q8NFU7 2136 aa13.13□□□□□ -0.31
PTPN7-214ENST00000491584 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
PTPN7-214ENST00000491584 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 K7ENM7 598 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 RFXAPO00287 272 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 TLL1O43897 1013 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 UPP2O95045 317 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 BMP1P13497 986 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 COL9A1P20849 921 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 PTMSP20962 102 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-214ENST00000491584 MAPK7Q13164 816 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 KYAT1Q16773 422 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 SLFN12LQ6IEE8 588 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 SPRED2Q7Z698 418 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 HERC6Q8IVU3 1022 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 ELOA2Q8IYF1 753 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-214ENST00000491584 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-214ENST00000491584 DAW1Q8N136 415 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 STAMQ92783 540 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 DNAJC19Q96DA6 116 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 ST6GALNAC4Q9H4F1 302 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 TMEM206Q9H813 350 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 OLFML3Q9NRN5 406 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 EXOC1Q9NV70 894 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 TMEM161AQ9NX61 479 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 ARHGAP28Q9P2N2 729 aa13.12□□□□□ -0.31
PTPN7-214ENST00000491584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-214ENST00000491584 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 ACTN4O43707 911 aaKnown RBP13.11□□□□□ -0.31
PTPN7-214ENST00000491584 TSPAN1O60635 241 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 ZNF623O75123 536 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 FGFR4P22455 802 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTPN7-214ENST00000491584 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 TFF2Q03403 129 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 TAP1Q03518 808 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 DSC3Q14574 896 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 POSTNQ15063 836 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 ATF7IP2Q5U623 682 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 ZNF720Q7Z2F6 126 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 SYCP3Q8IZU3 236 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 KCNN1Q92952 543 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 UHRF1Q96T88 793 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-214ENST00000491584 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 MINDY3Q9H8M7 445 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 RAPGEFL1Q9UHV5 662 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 NCOR1O75376 2440 aa13.11□□□□□ -0.31
PTPN7-214ENST00000491584 C9IYK1 514 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 CLDN3O15551 220 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 LPXNO60711 386 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 TOM1L1O75674 476 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 GJB5O95377 273 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 GCNT3O95395 438 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 ITGA4P13612 1032 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 LIG4P49917 911 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 GTF2BQ00403 316 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 RTN4RL1Q86UN2 441 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 SFR1Q86XK3 245 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 ECHDC2Q86YB7 292 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 NECAB3Q96P71 396 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 TNFSF13BQ9Y275 285 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-214ENST00000491584 CNTNAP2Q9UHC6 1331 aa13.1□□□□□ -0.31
PTPN7-214ENST00000491584 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-214ENST00000491584 FRMD3A2A2Y4 597 aa13.09□□□□□ -0.31
PTPN7-214ENST00000491584 HNRNPDLO14979 420 aaKnown RBP13.09□□□□□ -0.31
PTPN7-214ENST00000491584 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
PTPN7-214ENST00000491584 KCNQ1P51787 676 aa13.09□□□□□ -0.31
PTPN7-214ENST00000491584 YARSP54577 528 aaKnown RBP13.09□□□□□ -0.31
PTPN7-214ENST00000491584 SNRPFP62306 86 aaKnown RBP13.09□□□□□ -0.31
PTPN7-214ENST00000491584 FAM26FQ5R3K3 315 aa13.09□□□□□ -0.31
PTPN7-214ENST00000491584 FAM117BQ6P1L5 589 aa13.09□□□□□ -0.31
PTPN7-214ENST00000491584 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
PTPN7-214ENST00000491584 URGCPQ8TCY9 931 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms