RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 MAML2Q8IZL2 1156 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 CNTNAP3BQ96NU0 1288 aa15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 CNTNAP3Q9BZ76 1288 aa15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 NT5C3AQ9H0P0 336 aa15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 NUMBLQ9Y6R0 609 aa15.29■□□□□ 0.04
CTDSP1-210ENST00000491064 DDX11L8A8MPP1 907 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 LRRN2O75325 713 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 OR1G1P47890 313 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 STARD6P59095 220 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 DSG1Q02413 1049 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 RSPO4Q2I0M5 234 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 Q4G0T1 1027 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 GET4Q7L5D6 327 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 ST13P5Q8NFI4 369 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 CCDC148Q8NFR7 591 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 PHKBQ93100 1093 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 JPH2Q9BR39 696 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 PLEKHA4Q9H4M7 779 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 MINDY3Q9H8M7 445 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 PIDD1Q9HB75 910 aa15.28■□□□□ 0.04
CTDSP1-210ENST00000491064 NID2Q14112 1375 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 F8W810 466 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 TGM5O43548 720 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 KRT37O76014 449 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 C1RP00736 705 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 DSC1Q08554 894 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 PLA2G4FQ68DD2 849 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 PALB2Q86YC2 1186 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 PRKD2Q9BZL6 878 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 CHST7Q9NS84 486 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 ZDHHC7Q9NXF8 308 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 VPS54Q9P1Q0 977 aa15.27■□□□□ 0.04
CTDSP1-210ENST00000491064 COL4A3Q01955 1670 aa15.27■□□□□ 0.03
CTDSP1-210ENST00000491064 ARL5CA6NH57 179 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 GAS2O43903 313 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 TDP2O95551 362 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 ITGA4P13612 1032 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 PSMC5P62195 406 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 ZNF528Q3MIS6 628 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 LILRA6Q6PI73 481 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 CNNM3Q8NE01 707 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 TBCKQ8TEA7 893 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 SHDQ96IW2 340 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 B3GALT6Q96L58 329 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 RPP25Q9BUL9 199 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 MIOSQ9NXC5 875 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 IPPQ9Y573 584 aa15.26■□□□□ 0.03
CTDSP1-210ENST00000491064 CYP3A7-CYP3A51PA0A087WV96 503 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 SPTLC1O15269 473 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 SRGAP2CP0DJJ0 459 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 CYP3A7P24462 503 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 MLH1P40692 756 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 NPEPPSP55786 919 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 GPC5P78333 572 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 FGD1P98174 961 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 AKAP17AQ02040 695 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 LAMTOR4Q0VGL1 99 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 KRT32Q14532 448 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 NTRK3Q16288 839 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 VARS2Q5ST30 1063 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 GLYCTKQ8IVS8 523 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 ZNF579Q8NAF0 562 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 ETNPPLQ8TBG4 499 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 PRPF31Q8WWY3 499 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 PSPC1Q8WXF1 523 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 SLC7A3Q8WY07 619 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 FGF14Q92915 247 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 TMEM143Q96AN5 459 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 GAD1Q99259 594 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 DDX23Q9BUQ8 820 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 EIF2AQ9BY44 585 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 DHX33Q9H6R0 707 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 FNIP2Q9P278 1114 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 FBXO4Q9UKT5 387 aa15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 ZFP37Q9Y6Q3 630 aaPredicted RBP15.25■□□□□ 0.03
CTDSP1-210ENST00000491064 MAP1BP46821 2468 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 KANSL1LA0AUZ9 987 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 EML1O00423 815 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 ZMYND10O75800 440 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 CPA1P15085 419 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 SCNN1GP51170 649 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 USP41Q3LFD5 358 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 FUT10Q6P4F1 479 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 PARM1Q6UWI2 310 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 Q6ZUG5 572 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 GPR65Q8IYL9 337 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 BRF1Q92994 677 aa15.24■□□□□ 0.03
CTDSP1-210ENST00000491064 BORCS6Q96GS4 357 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms