RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RAC3P60763 192 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 MGAT2Q10469 447 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 GTF2H3Q13889 308 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 ACAP1Q15027 740 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 SURF1Q15526 300 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 KRT40Q6A162 431 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 LCNL1Q6ZST4 164 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 TCEAL8Q8IYN2 117 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 FEZF2Q8TBJ5 459 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 CFHR4Q92496 578 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 RABGGTAQ92696 567 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 SERPINB13Q9UIV8 391 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 LIMCH1Q9UPQ0 1083 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 PMS2P1A4D2B8 440 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
CD46-216ENST00000490278 SLC26A4O43511 780 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 ENDOD1O94919 500 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 POU2F2P09086 479 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 ECHS1P30084 290 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 DUSP2Q05923 314 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 MLC1Q15049 377 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 MST1LQ2TV78 715 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 MIGA2Q7L4E1 593 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 WDR75Q8IWA0 830 aaKnown RBP5.13□□□□□ -1.59
CD46-216ENST00000490278 ZDHHC14Q8IZN3 488 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 MAGEB6Q8N7X4 407 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 ZNF480Q8WV37 535 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 DPF2Q92785 391 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 HDAC10Q969S8 669 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 NEIL1Q96FI4 390 aaPredicted RBP5.13□□□□□ -1.59
CD46-216ENST00000490278 RPL10LQ96L21 214 aaKnown RBP5.13□□□□□ -1.59
CD46-216ENST00000490278 AIFM3Q96NN9 605 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 C7orf25Q9BPX7 421 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 ZCCHC4Q9H5U6 513 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 SEC61A2Q9H9S3 476 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 IPPQ9Y573 584 aa5.13□□□□□ -1.59
CD46-216ENST00000490278 GOLGA6CA6NDK9 693 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GOLGA6BA6NDN3 693 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 CCDC154A6NI56 674 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 MATN2O00339 956 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 NRP1O14786 923 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 PRPF3O43395 683 aaKnown RBP5.12□□□□□ -1.59
CD46-216ENST00000490278 LAMTOR5O43504 91 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GASTP01350 101 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GOLGA6DP0CG33 693 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GYPEP15421 78 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 PDCP20941 246 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 EDNRBP24530 442 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 CNR2P34972 360 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 CRHR1P34998 444 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 EPHB4P54760 987 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 ADAM8P78325 824 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 C3orf36Q3SXR2 165 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 HSP90AB2PQ58FF8 381 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 IFIT1BQ5T764 474 aaKnown RBP5.12□□□□□ -1.59
CD46-216ENST00000490278 SLFN13Q68D06 897 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 Q6ZVL8 140 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 OR2I1PQ8NGU4 316 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.12□□□□□ -1.59
CD46-216ENST00000490278 HOXB13Q92826 284 aaPredicted RBP5.12□□□□□ -1.59
CD46-216ENST00000490278 LMF1Q96S06 567 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GPHA2Q96T91 129 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 C12orf65Q9H3J6 166 aaKnown RBP5.12□□□□□ -1.59
CD46-216ENST00000490278 MSL2Q9HCI7 577 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GOLGA6AQ9NYA3 693 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 GPRC5DQ9NZD1 345 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 OAZ3Q9UMX2 235 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 DUSP10Q9Y6W6 482 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 ADAMTS20P59510 1910 aa5.12□□□□□ -1.59
CD46-216ENST00000490278 CDC14BO60729 498 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 DTNBO60941 627 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 ITGA10O75578 1167 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 OFD1O75665 1012 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 HSPA6P17066 643 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 ATF3P18847 181 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 CR2P20023 1033 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 LPOP22079 712 aaPredicted RBP5.11□□□□□ -1.59
CD46-216ENST00000490278 PER3P56645 1201 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 SEPT2Q15019 361 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 MINDY4Q4G0A6 757 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 LILRA6Q6PI73 481 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 USP45Q70EL2 814 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 EPM2AIP1Q7L775 607 aaPredicted RBP5.11□□□□□ -1.59
CD46-216ENST00000490278 FRMD5Q7Z6J6 570 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 CATIPQ7Z7H3 387 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 C14orf80Q86SX3 495 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 CMTM4Q8IZR5 234 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 PRR18Q8N4B5 295 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 LILRA3Q8N6C8 439 aaPredicted RBP5.11□□□□□ -1.59
CD46-216ENST00000490278 SHCBP1Q8NEM2 672 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 OR7D4Q8NG98 312 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 CLIP3Q96DZ5 547 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 C8orf48Q96LL4 319 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 LRGUKQ96M69 825 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 LRRC37BQ96QE4 947 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 UHRF1Q96T88 793 aaPredicted RBP5.11□□□□□ -1.59
CD46-216ENST00000490278 DPYSL5Q9BPU6 564 aa5.11□□□□□ -1.59
CD46-216ENST00000490278 GTPBP4Q9BZE4 634 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms