RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PCDHA4Q9UN74 947 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 OTOGLQ3ZCN5 2332 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 TDRD15B5MCY1 1934 aaKnown RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 DOCK6Q96HP0 2047 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 F8W810 466 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 EML1O00423 815 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 EFEMP2O95967 443 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 ITGA4P13612 1032 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 CCT2P78371 535 aaKnown RBP15.61■□□□□ 0.09
VARS-227ENST00000489979 DSG1Q02413 1049 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 LAMTOR4Q0VGL1 99 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 PHLDB3Q6NSJ2 640 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 BLOC1S2Q6QNY1 142 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 SKAP1Q86WV1 359 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 PALB2Q86YC2 1186 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 PSPC1Q8WXF1 523 aaKnown RBP15.61■□□□□ 0.09
VARS-227ENST00000489979 CEP170P1Q96L14 293 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 MBOAT7Q96N66 472 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 GAD1Q99259 594 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 HINFPQ9BQA5 517 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 NT5C3AQ9H0P0 336 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 PIDD1Q9HB75 910 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 NCOA5Q9HCD5 579 aaKnown RBP15.61■□□□□ 0.09
VARS-227ENST00000489979 UBN1Q9NPG3 1134 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 ARHGEF3Q9NR81 526 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 BMP2KQ9NSY1 1161 aaPredicted RBP15.61■□□□□ 0.09
VARS-227ENST00000489979 MIOSQ9NXC5 875 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 SIT1Q9Y3P8 196 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 FRYLO94915 3013 aa15.61■□□□□ 0.09
VARS-227ENST00000489979 ARL5CA6NH57 179 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 GAS2O43903 313 aaKnown RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 SP9P0CG40 484 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 LAMP2P13473 410 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 QARSP47897 775 aaKnown RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 DSC1Q08554 894 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 ZC3H14Q6PJT7 736 aaKnown RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 POTEGQ6S5H5 508 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 GET4Q7L5D6 327 aaPredicted RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 CNNM3Q8NE01 707 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 ST13P5Q8NFI4 369 aaPredicted RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 HDAC7Q8WUI4 952 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 KCNB2Q92953 911 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 B3GALT6Q96L58 329 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 EIF2AQ9BY44 585 aaKnown RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 DHX33Q9H6R0 707 aaKnown RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 DLGAP2Q9P1A6 1054 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 DDX25Q9UHL0 483 aaKnown RBP15.6■□□□□ 0.09
VARS-227ENST00000489979 IPPQ9Y573 584 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 CEP250Q9BV73 2442 aa15.6■□□□□ 0.09
VARS-227ENST00000489979 M0R2N6 131 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 TGM5O43548 720 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 SLC37A4O43826 429 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 PAPLNO95428 1278 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 RPS6KB1P23443 525 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 MLH1P40692 756 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 SCNN1GP51170 649 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 HTR4Q13639 388 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 DCLRE1AQ6PJP8 1040 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 MOXD1Q6UVY6 613 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 GLYCTKQ8IVS8 523 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 C1orf210Q8IVY1 113 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 EXOC8Q8IYI6 725 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 BLIDQ8IZY5 108 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 FBXL16Q8N461 479 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 RNF149Q8NC42 400 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 AGXT2Q9BYV1 514 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 FOXQ1Q9C009 403 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 SLKQ9H2G2 1235 aaPredicted RBP15.59■□□□□ 0.09
VARS-227ENST00000489979 PLEKHA4Q9H4M7 779 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.59■□□□□ 0.09
VARS-227ENST00000489979 WRAP73Q9P2S5 460 aaPredicted RBP15.59■□□□□ 0.09
VARS-227ENST00000489979 HES2Q9Y543 173 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 SNX14Q9Y5W7 946 aa15.59■□□□□ 0.09
VARS-227ENST00000489979 ANHXE9PGG2 379 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 DKC1O60832 514 aaKnown RBP eCLIP15.58■□□□□ 0.08
VARS-227ENST00000489979 NR1I2O75469 434 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 ERLIN2O94905 339 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 P4HBP07237 508 aaKnown RBP15.58■□□□□ 0.08
VARS-227ENST00000489979 PDIA3P30101 505 aaKnown RBP15.58■□□□□ 0.08
VARS-227ENST00000489979 RFC5P40937 340 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 PPP2R5CQ13362 524 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 PUM1Q14671 1186 aaKnown RBP eCLIP15.58■□□□□ 0.082e-6■□□□□ 8.9
VARS-227ENST00000489979 FERMT3Q86UX7 667 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 DCLK2Q8N568 766 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 TCP11Q8WWU5 503 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 RUBCNQ92622 972 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 CPB2Q96IY4 423 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 ZFP42Q96MM3 310 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 COLEC11Q9BWP8 271 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 APOL6Q9BWW8 343 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 GPR62Q9BZJ7 368 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 PRKD2Q9BZL6 878 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 SLC2A4RGQ9NR83 387 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 ZDHHC7Q9NXF8 308 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 VAV3Q9UKW4 847 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 PPME1Q9Y570 386 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 NUMBLQ9Y6R0 609 aa15.58■□□□□ 0.08
VARS-227ENST00000489979 MIA3Q5JRA6 1907 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms