RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TREHO43280 583 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 NLRP11P59045 1033 aaKnown RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 HSP90AA2PQ14568 343 aaPredicted RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 FAM187BQ17R55 369 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 CBWD2Q8IUF1 395 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 ACO2Q99798 780 aaKnown RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 MINDY3Q9H8M7 445 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 KIAA1586Q9HCI6 787 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 ANKFY1Q9P2R3 1169 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 GTF2IRD1Q9UHL9 959 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 SIK3Q9Y2K2 1263 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 TOM1L1O75674 476 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 GYPCP04921 128 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 ADRB2P07550 413 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 MATR3P43243 847 aaKnown RBP eCLIP23.6■■□□□ 1.377e-8■■□□□ 11.8
SMC4-221ENST00000489573 ZNF200P98182 395 aaPredicted RBP23.6■■□□□ 1.37
SMC4-221ENST00000489573 RBL2Q08999 1139 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 PRPF4BQ13523 1007 aaKnown RBP23.6■■□□□ 1.37
SMC4-221ENST00000489573 CCDC155Q8N6L0 562 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 ZBTB45Q96K62 511 aaPredicted RBP23.6■■□□□ 1.37
SMC4-221ENST00000489573 NUP58Q9BVL2 599 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 AGO2Q9UKV8 859 aaKnown RBP23.6■■□□□ 1.37
SMC4-221ENST00000489573 PTPN22Q9Y2R2 807 aa23.6■■□□□ 1.37
SMC4-221ENST00000489573 A0A0B4J269 797 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 TTLL13PA6NNM8 815 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 AKR1B15C9JRZ8 316 aaPredicted RBP23.59■■□□□ 1.37
SMC4-221ENST00000489573 EXTL3O43909 919 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 KLK7P49862 253 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 VAMP7P51809 220 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 SRGAP1Q7Z6B7 1085 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 TNS4Q8IZW8 715 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 MSTO1Q9BUK6 570 aa23.59■■□□□ 1.37
SMC4-221ENST00000489573 CABYRO75952 493 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 GOLGA8FQ08AF8 430 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 GOLGA8DPQ0D2H9 430 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 LRMPQ12912 555 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 LHX8Q68G74 356 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 TAF2Q6P1X5 1199 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 TSHZ1Q6ZSZ6 1077 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 SESTD1Q86VW0 696 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 SH3TC2Q8TF17 1288 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 CPLX3Q8WVH0 158 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 DNAJB3Q8WWF6 145 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 IQCDQ96DY2 449 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 PRIMPOLQ96LW4 560 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 FAM213AQ9BRX8 229 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 HAPLN2Q9GZV7 340 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 ADAMTS10Q9H324 1103 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 ZKSCAN5Q9Y2L8 839 aa23.58■■□□□ 1.37
SMC4-221ENST00000489573 CLDN3O15551 220 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 MFAP3LO75121 409 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 LDHAP00338 332 aaKnown RBP23.57■■□□□ 1.36
SMC4-221ENST00000489573 TRIM49P0CI25 452 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TRIM49CP0CI26 452 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TRIM21P19474 475 aaKnown RBP23.57■■□□□ 1.36
SMC4-221ENST00000489573 CASP14P31944 242 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 MCCD1P59942 119 aaPredicted RBP23.57■■□□□ 1.36
SMC4-221ENST00000489573 KCNMA1Q12791 1236 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TMEM132AQ24JP5 1023 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 KIZQ2M2Z5 673 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 FAM47CQ5HY64 1035 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 FIGNQ5HY92 759 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 ATF7IP2Q5U623 682 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 CNGA4Q8IV77 575 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TC2NQ8N9U0 490 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 MFSD14AQ96MC6 490 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 GCOM2Q9BZD3 368 aaPredicted RBP23.57■■□□□ 1.36
SMC4-221ENST00000489573 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.57■■□□□ 1.361e-147■■■■■ 345.5
SMC4-221ENST00000489573 CNTNAP2Q9UHC6 1331 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 ZNF233A6NK53 670 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 B4GALT5O43286 388 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 GPR32O75388 356 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 IQCF3P0C7M6 154 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 PROZP22891 400 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 FXR1P51114 621 aaKnown RBP eCLIP23.57■■□□□ 1.36
SMC4-221ENST00000489573 ADKP55263 362 aaKnown RBP23.57■■□□□ 1.36
SMC4-221ENST00000489573 ENPEPQ07075 957 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 CYP24A1Q07973 514 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TMEM62Q0P6H9 643 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 AMHR2Q16671 573 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 MPZL3Q6UWV2 235 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 ZNF710Q8N1W2 664 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 NME8Q8N427 588 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TCHPQ9BT92 498 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TTYH3Q9C0H2 523 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 MMRN2Q9H8L6 949 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 TNFSF13BQ9Y275 285 aa23.57■■□□□ 1.36
SMC4-221ENST00000489573 GTPBP10A4D1E9 387 aaKnown RBP23.56■■□□□ 1.36
SMC4-221ENST00000489573 MOXD2PA6NHM9 499 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 ABLIM1O14639 778 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 FMO5P49326 533 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 ACLYP53396 1101 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 MCL1Q07820 350 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 GDF6Q6KF10 455 aaPredicted RBP23.56■■□□□ 1.36
SMC4-221ENST00000489573 USP37Q86T82 979 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 ZSCAN30Q86W11 494 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 PLEKHO2Q8TD55 490 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 TMC2Q8TDI7 906 aa23.56■■□□□ 1.36
SMC4-221ENST00000489573 TSEN34Q9BSV6 310 aaKnown RBP23.56■■□□□ 1.36
SMC4-221ENST00000489573 NRDCO43847 1150 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms