RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PLIN2Q99541 437 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 MINDY3Q9H8M7 445 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 TLR9Q9NR96 1032 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 CLDND1Q9NY35 253 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 FAM13BQ9NYF5 915 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 SERTAD1Q9UHV2 236 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 FNDC1Q4ZHG4 1894 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 A0A087WWV3 80 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 FSD2A1L4K1 749 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 E9PMD0 336 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 USO1O60763 962 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 CSPG5O95196 566 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 AXLP30530 894 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 KRT17Q04695 432 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 CAPSQ13938 189 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 EP400NLQ6ZTU2 488 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 MICAL1Q8TDZ2 1067 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 DHX58Q96C10 678 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 CCDC51Q96ER9 411 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 TIGD1Q96MW7 591 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 POLR3FQ9H1D9 316 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 CLSTN2Q9H4D0 955 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 PCDHB2Q9Y5E7 798 aa11.66□□□□□ -0.54
SCAMP4-208ENST00000489554 KIAA1671Q9BY89 1806 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 ARHGEF35A5YM69 484 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 H3BQ06 376 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 GLRA2P23416 452 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 HOXA11P31270 313 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 IRS1P35568 1242 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 NOTUMQ6P988 496 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 RBM43Q6ZSC3 357 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 MRPL10Q7Z7H8 261 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 GRAMD1CQ8IYS0 662 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 EFHBQ8N7U6 833 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 ASAP3Q8TDY4 903 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 RAD54LQ92698 747 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 LPPQ93052 612 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 NECAB3Q96P71 396 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 KBTBD4Q9NVX7 518 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 SPG21Q9NZD8 308 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.54
SCAMP4-208ENST00000489554 XIRP2A4UGR9 3374 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 BRWD1Q9NSI6 2320 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 GRXCR2A6NFK2 248 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 FSCN2O14926 492 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 TSPAN1O60635 241 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 OFD1O75665 1012 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 CYP11B2P19099 503 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 CASP1P29466 404 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 LTBRP36941 435 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 TXLNAP40222 546 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 STAT6P42226 847 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 NRIP1P48552 1158 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 SLC12A3P55017 1021 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 RNASELQ05823 741 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 MBTD1Q05BQ5 628 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 ADAM15Q13444 863 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 MCM6Q14566 821 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 UBXN11Q5T124 520 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 RRAGBQ5VZM2 374 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 PADI6Q6TGC4 694 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 ADGRD2Q7Z7M1 963 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 ELOA2Q8IYF1 753 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 SLC39A11Q8N1S5 342 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 KCTD17Q8N5Z5 321 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 URGCPQ8TCY9 931 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 IGFLR1Q9H665 355 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 TLE6Q9H808 572 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 NGRNQ9NPE2 291 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 UBN1Q9NPG3 1134 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 KANSL3Q9P2N6 904 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 CCDC39Q9UFE4 941 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 USP25Q9UHP3 1055 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
SCAMP4-208ENST00000489554 REV3LO60673 3130 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms