RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 EIF3JO75822 258 aaKnown RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 HLA-EP13747 358 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 UBA1P22314 1058 aaKnown RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 NTHL1P78549 312 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 MARCH8Q5T0T0 291 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 SYDE2Q5VT97 1194 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 NFXL1Q6ZNB6 911 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 KCTD1Q719H9 257 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 MAP4K3Q8IVH8 894 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 GALNT15Q8N3T1 639 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 LCORLQ8N3X6 602 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 FAM26EQ8N5C1 309 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 ITFG1Q8TB96 612 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 NSUN6Q8TEA1 469 aaKnown RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 CEP95Q96GE4 821 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 ZNF334Q9HCZ1 680 aaPredicted RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 MRPL17Q9NRX2 175 aaKnown RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 MTMR4Q9NYA4 1195 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 ZNF215Q9UL58 517 aaPredicted RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 M0QZ92 97 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 SUV39H1O43463 412 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 TTLL1O95922 423 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 SPATA31D3P0C874 917 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 MLLT6P55198 1093 aaPredicted RBP8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 TMEM62Q0P6H9 643 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 CCINQ13939 588 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 SLC23A3Q6PIS1 610 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 C1orf228Q6PIY5 440 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 SPATA31D4Q6ZUB0 917 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 SPACA3Q8IXA5 215 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 CAMKK1Q8N5S9 505 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 PIGKQ92643 395 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 IRF7Q92985 503 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 ELSPBP1Q96BH3 223 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 MSANTD3Q96H12 275 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 CELF4Q9BZC1 486 aaKnown RBP8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 FAM49AQ9H0Q0 323 aaPredicted RBP8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 ATP8A2Q9NTI2 1148 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 COL20A1Q9P218 1284 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 PCDHB15Q9Y5E8 787 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 VWA8A3KMH1 1905 aa8.74□□□□□ -1.01
EXOSC3-206ENST00000489414 FAM149AA5PLN7 773 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 ZC3H11AO75152 810 aaKnown RBP eCLIP8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 C1RP00736 705 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 MCCP23508 829 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 GBP1P32455 592 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 KCNH2Q12809 1159 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 PPFIA1Q13136 1202 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 G3BP1Q13283 466 aaKnown RBP eCLIP8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 GRM2Q14416 872 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 GRIK4Q16099 956 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 PREPLQ4J6C6 727 aaPredicted RBP8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 CCDC158Q5M9N0 1113 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 TANGO2Q6ICL3 276 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 PKN3Q6P5Z2 889 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 KCNV1Q6PIU1 500 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 SYNPOQ8N3V7 929 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 RGS22Q8NE09 1264 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 NXPE2Q96DL1 559 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 TAAR1Q96RJ0 339 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 MRPL9Q9BYD2 267 aaKnown RBP8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 MLXIPQ9HAP2 919 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 STK39Q9UEW8 545 aa8.73□□□□□ -1.01
EXOSC3-206ENST00000489414 DOCK5Q9H7D0 1870 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 NBEAL1Q6ZS30 2694 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 NOP56O00567 594 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 PRKAB2O43741 272 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 CBFA2T3O75081 653 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 RPL17P18621 184 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 FCARP24071 287 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 ATXN3P54252 364 aaPredicted RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 SLC14A1Q13336 389 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 DSC3Q14574 896 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 ARHGAP40Q5TG30 622 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 RCSD1Q6JBY9 416 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 ZC3H18Q86VM9 953 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 VSIG10LQ86VR7 867 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 NAXDQ8IW45 347 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 AMOTL1Q8IY63 956 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 CHMP4CQ96CF2 233 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 ZBTB10Q96DT7 871 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 RPS6KC1Q96S38 1066 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 TRMT61BQ9BVS5 477 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 ANTXR1Q9H6X2 564 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 DNAAF2Q9NVR5 837 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 SLC8A2Q9UPR5 921 aa8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 NOC2LQ9Y3T9 749 aaKnown RBP8.72□□□□□ -1.01
EXOSC3-206ENST00000489414 MED13Q9UHV7 2174 aa8.71□□□□□ -1.01
EXOSC3-206ENST00000489414 ARNTLO00327 626 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 PLK4O00444 970 aa8.71□□□□□ -1.02
EXOSC3-206ENST00000489414 TGM5O43548 720 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms