RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CCDC12Q8WUD4 166 aaPredicted RBP18.15■□□□□ 0.5
USP48-210ENST00000489108 SHDQ96IW2 340 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 ESYT1Q9BSJ8 1104 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 PRKD2Q9BZL6 878 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 PLEKHA4Q9H4M7 779 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
USP48-210ENST00000489108 NAP1L2Q9ULW6 460 aaPredicted RBP18.15■□□□□ 0.5
USP48-210ENST00000489108 CNTNAP2Q9UHC6 1331 aa18.15■□□□□ 0.5
USP48-210ENST00000489108 TGM5O43548 720 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 PSMD10O75832 226 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 DSG1Q02413 1049 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 SNW1Q13573 536 aaKnown RBP18.14■□□□□ 0.49
USP48-210ENST00000489108 ZNF528Q3MIS6 628 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 GLYCTKQ8IVS8 523 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 RDM1Q8NG50 284 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 PHKBQ93100 1093 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 B3GALT6Q96L58 329 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 MINDY3Q9H8M7 445 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 ANO2Q9NQ90 1003 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 MIOSQ9NXC5 875 aa18.14■□□□□ 0.49
USP48-210ENST00000489108 MTF2Q9Y483 593 aaPredicted RBP18.14■□□□□ 0.49
USP48-210ENST00000489108 MYH15Q9Y2K3 1946 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 ACACBO00763 2458 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 COL4A3Q01955 1670 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 KANSL1LA0AUZ9 987 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 LAMTOR5O43504 91 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 SRGAP2CP0DJJ0 459 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
USP48-210ENST00000489108 USP11P51784 963 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 CSTF1Q05048 431 aaKnown RBP18.13■□□□□ 0.49
USP48-210ENST00000489108 LILRA6Q6PI73 481 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 PARM1Q6UWI2 310 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 ANO5Q75V66 913 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 SMG8Q8ND04 991 aaKnown RBP18.13■□□□□ 0.49
USP48-210ENST00000489108 FGF14Q92915 247 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 BORCS6Q96GS4 357 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 BCO2Q9BYV7 579 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 CHST7Q9NS84 486 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 ZDHHC7Q9NXF8 308 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 FBXO4Q9UKT5 387 aa18.13■□□□□ 0.49
USP48-210ENST00000489108 PRPF3O43395 683 aaKnown RBP18.12■□□□□ 0.49
USP48-210ENST00000489108 ITGA4P13612 1032 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 SDHBP21912 280 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 FSHRP23945 695 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 ADCK5Q3MIX3 580 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 PLA2G4FQ68DD2 849 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 B3GNT9Q6UX72 402 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 GPR161Q8N6U8 529 aaKnown RBP18.12■□□□□ 0.49
USP48-210ENST00000489108 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 ATRIPQ8WXE1 791 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 GAD1Q99259 594 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 DDX23Q9BUQ8 820 aaKnown RBP18.12■□□□□ 0.49
USP48-210ENST00000489108 COL4A3BPQ9Y5P4 624 aa18.12■□□□□ 0.49
USP48-210ENST00000489108 ARL5CA6NH57 179 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 SPTLC1O15269 473 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 C1RP00736 705 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 RPL17P18621 184 aaKnown RBP18.11■□□□□ 0.49
USP48-210ENST00000489108 NPEPPSP55786 919 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 DSC1Q08554 894 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 UBXN2BQ14CS0 331 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 SLC44A4Q53GD3 710 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 SRGAP1Q7Z6B7 1085 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
USP48-210ENST00000489108 PRPF31Q8WWY3 499 aaKnown RBP18.11■□□□□ 0.49
USP48-210ENST00000489108 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
USP48-210ENST00000489108 GPR62Q9BZJ7 368 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 UBN1Q9NPG3 1134 aa18.11■□□□□ 0.49
USP48-210ENST00000489108 ZFP37Q9Y6Q3 630 aaPredicted RBP18.11■□□□□ 0.49
USP48-210ENST00000489108 TDRD15B5MCY1 1934 aaKnown RBP18.1■□□□□ 0.49
USP48-210ENST00000489108 PATJQ8NI35 1801 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 DCDC2BA2VCK2 349 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 FAM170BA6NMN3 283 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 ZMYND10O75800 440 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 CD72P21854 359 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 SCNN1GP51170 649 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 RCAN1P53805 252 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 NTHL1P78549 312 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 MLF2Q15773 248 aaPredicted RBP18.1■□□□□ 0.49
USP48-210ENST00000489108 GRASPQ7Z6J2 395 aaPredicted RBP18.1■□□□□ 0.49
USP48-210ENST00000489108 RASEFQ8IZ41 740 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 CNNM3Q8NE01 707 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 COLEC11Q9BWP8 271 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 FNIP2Q9P278 1114 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 CDH7Q9ULB5 785 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 IPPQ9Y573 584 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 PCDHGA2Q9Y5H1 932 aa18.1■□□□□ 0.49
USP48-210ENST00000489108 PRR5-ARHGAP8B1AHC4 643 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 MLH1P40692 756 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 PSMC5P62195 406 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 ARHGAP8P85298 464 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 PRKCQQ04759 706 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 USP41Q3LFD5 358 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 Q4G0T1 1027 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 ZBTB44Q8NCP5 570 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 TBCKQ8TEA7 893 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 SECISBP2LQ93073 1101 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms