RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 UNC119BA6NIH7 251 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 ESRRBO95718 433 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 ZSCAN20P17040 1043 aaPredicted RBP4.29□□□□□ -1.72
CCDC93-209ENST00000488908 IGFALSP35858 605 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 DUSP2Q05923 314 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 MPP3Q13368 585 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 UNQ6494/PRO21346Q6UXR6 183 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 XYLT1Q86Y38 959 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 POFUT1Q9H488 388 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 SPON1Q9HCB6 807 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 USP36Q9P275 1121 aaKnown RBP4.29□□□□□ -1.72
CCDC93-209ENST00000488908 TLK1Q9UKI8 766 aa4.29□□□□□ -1.72
CCDC93-209ENST00000488908 SLC9A1P19634 815 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 MGAT1P26572 445 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 PLA2G5P39877 138 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 MXRA7P84157 204 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 CD69Q07108 199 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 TP53BP2Q13625 1128 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 RASA3Q14644 834 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 ESRP1Q6NXG1 681 aaKnown RBP4.28□□□□□ -1.72
CCDC93-209ENST00000488908 DRICH1Q6PGQ1 229 aaPredicted RBP4.28□□□□□ -1.72
CCDC93-209ENST00000488908 GPRIN1Q7Z2K8 1008 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 ZZZ3Q8IYH5 903 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 DEPDC7Q96QD5 511 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 NCOA5Q9HCD5 579 aaKnown RBP4.28□□□□□ -1.72
CCDC93-209ENST00000488908 INTS7Q9NVH2 962 aaKnown RBP4.28□□□□□ -1.72
CCDC93-209ENST00000488908 RNF181Q9P0P0 153 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 PCDHB6Q9Y5E3 794 aa4.28□□□□□ -1.72
CCDC93-209ENST00000488908 PCDH8O95206 1070 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 LY86O95711 162 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 RBP3P10745 1247 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 ARMC6Q6NXE6 501 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 OR10H5Q8NGA6 315 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 ASB10Q8WXI3 467 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
CCDC93-209ENST00000488908 ELF4Q99607 663 aaPredicted RBP4.27□□□□□ -1.73
CCDC93-209ENST00000488908 DUSP26Q9BV47 211 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 TEX101Q9BY14 249 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 PODXL2Q9NZ53 605 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
CCDC93-209ENST00000488908 MYPNQ86TC9 1320 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 SPDEFO95238 335 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 IGLV2-14P01704 120 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 EGR2P11161 476 aaPredicted RBP4.26□□□□□ -1.73
CCDC93-209ENST00000488908 ITGAMP11215 1152 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 CTGFP29279 349 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 MPLP40238 635 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 FOXF2Q12947 444 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 PDCD4Q53EL6 469 aaKnown RBP4.26□□□□□ -1.73
CCDC93-209ENST00000488908 TAS1R1Q7RTX1 841 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 SYT12Q8IV01 421 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 SLC44A3Q8N4M1 653 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 JMYQ8N9B5 988 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 RTF1Q92541 710 aaKnown RBP4.26□□□□□ -1.73
CCDC93-209ENST00000488908 ADAM2Q99965 735 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 KIAA1586Q9HCI6 787 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 TOMM22Q9NS69 142 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.26□□□□□ -1.73
CCDC93-209ENST00000488908 B4GALT6Q9UBX8 382 aa4.26□□□□□ -1.73
CCDC93-209ENST00000488908 MAST3O60307 1309 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 ARHGEF17Q96PE2 2063 aaPredicted RBP4.25□□□□□ -1.73
CCDC93-209ENST00000488908 ST20-MTHFSA0A0A6YYL1 179 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 FAM221BA6H8Z2 402 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 B5MCH6 92 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 PLD2O14939 933 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 OPA1O60313 960 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 ASLP04424 464 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 XPAP23025 273 aaPredicted RBP4.25□□□□□ -1.73
CCDC93-209ENST00000488908 APBA1Q02410 837 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 NHLH1Q02575 133 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 RESTQ13127 1097 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 EFCAB12Q6NXP0 572 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 BTNL9Q6UXG8 535 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 SRRM1Q8IYB3 904 aaKnown RBP4.25□□□□□ -1.73
CCDC93-209ENST00000488908 MSL3Q8N5Y2 521 aaKnown RBP4.25□□□□□ -1.73
CCDC93-209ENST00000488908 SCARB1Q8WTV0 552 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 DNAJC7Q99615 494 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 ALG13Q9NP73 1137 aaKnown RBP4.25□□□□□ -1.73
CCDC93-209ENST00000488908 SNTG2Q9NY99 539 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 POGKQ9P215 609 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 RNF7Q9UBF6 113 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 FPGT-TNNI3KV9GXZ4 949 aa4.25□□□□□ -1.73
CCDC93-209ENST00000488908 MARCH11A6NNE9 402 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 NRP2O60462 931 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 RBMXL2O75526 392 aaKnown RBP4.24□□□□□ -1.73
CCDC93-209ENST00000488908 SEC24DO94855 1032 aaPredicted RBP4.24□□□□□ -1.73
CCDC93-209ENST00000488908 ATP2B1P20020 1258 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 CD40P25942 277 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 SERINC3Q13530 473 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 PIK3R6Q5UE93 754 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 LMBR1LQ6UX01 489 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 ZNF384Q8TF68 577 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 CDC5LQ99459 802 aaKnown RBP4.24□□□□□ -1.73
CCDC93-209ENST00000488908 HIRIP3Q9BW71 556 aaPredicted RBP4.24□□□□□ -1.73
CCDC93-209ENST00000488908 MAP3K2Q9Y2U5 619 aa4.24□□□□□ -1.73
CCDC93-209ENST00000488908 USP15Q9Y4E8 981 aaPredicted RBP4.24□□□□□ -1.73
CCDC93-209ENST00000488908 CBX4O00257 560 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 CDKL5O76039 1030 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 RAPGEF3O95398 923 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms