RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 AGPAT5Q9NUQ2 364 aa12.17□□□□□ -0.46
NUP98-212ENST00000488828 PRMT7Q9NVM4 692 aaPredicted RBP12.17□□□□□ -0.46
NUP98-212ENST00000488828 KCNG1Q9UIX4 513 aa12.17□□□□□ -0.46
NUP98-212ENST00000488828 ZDHHC9Q9Y397 364 aa12.17□□□□□ -0.46
NUP98-212ENST00000488828 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
NUP98-212ENST00000488828 LOXHD1Q8IVV2 1947 aa12.17□□□□□ -0.46
NUP98-212ENST00000488828 LAMA3Q16787 3333 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 ADGRA3Q8IWK6 1321 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 TSPAN1O60635 241 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 FAM13AO94988 1023 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 EOMESO95936 686 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 AXLP30530 894 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 SLC12A3P55017 1021 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 NUCB2P80303 420 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
NUP98-212ENST00000488828 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 TMEM192Q8IY95 271 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
NUP98-212ENST00000488828 MICALL1Q8N3F8 863 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 MYCT1Q8N699 235 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 LARP4BQ92615 738 aaKnown RBP12.16□□□□□ -0.46
NUP98-212ENST00000488828 LPPQ93052 612 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 KIFC3Q9BVG8 833 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 APOL6Q9BWW8 343 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 FAM13BQ9NYF5 915 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 KCND2Q9NZV8 630 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 KIAA1468Q9P260 1216 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 SIP14410 1827 aa12.16□□□□□ -0.46
NUP98-212ENST00000488828 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 SLC16A4O15374 487 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 B4GALT5O43286 388 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 TBCAO75347 108 aaKnown RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 PRKCBP05771 671 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 ARF4P18085 180 aaPredicted RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 GUCY2CP25092 1073 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 CTNNB1P35222 781 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 NPTX2P47972 431 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 RAB27AP51159 221 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 ERVK-21P61565 698 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 RNASELQ05823 741 aaKnown RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 STRN3Q13033 797 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 GLB1LQ6UWU2 654 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 DYMQ7RTS9 669 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 SPRED2Q7Z698 418 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 CDR2LQ86X02 465 aaPredicted RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 HACE1Q8IYU2 909 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 ZNF689Q96CS4 500 aaPredicted RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 C17orf75Q9HAS0 396 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 BLOC1S4Q9NUP1 217 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 LARSQ9P2J5 1176 aaKnown RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 STK17AQ9UEE5 414 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 RCOR1Q9UKL0 485 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 PCDHA7Q9UN72 937 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 USP20Q9Y2K6 914 aa12.15□□□□□ -0.46
NUP98-212ENST00000488828 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
NUP98-212ENST00000488828 ACKR2O00590 384 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 NPTXRO95502 500 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 ITGA4P13612 1032 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 PLS3P13797 630 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 BMPR1AP36894 532 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 GPM6BQ13491 265 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 CCDC85BQ15834 202 aaPredicted RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 SLC27A1Q6PCB7 646 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 DAW1Q8N136 415 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 CRIPAKQ8N1N5 446 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 IQUBQ8NA54 791 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 DHX58Q96C10 678 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 SAMD11Q96NU1 681 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 REEP2Q9BRK0 252 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 ADPGKQ9BRR6 497 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 EIF2AQ9BY44 585 aaKnown RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 SCAND2PQ9GZW5 306 aaPredicted RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 FZD8Q9H461 694 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 RWDD3Q9Y3V2 267 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 PCDHB12Q9Y5F1 795 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 MRPL42Q9Y6G3 142 aaKnown RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 MORC2Q9Y6X9 1032 aaPredicted RBP12.14□□□□□ -0.47
NUP98-212ENST00000488828 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
NUP98-212ENST00000488828 A0A1B0GUA9 196 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 EPOPA6NHQ4 379 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 H0YCG3 227 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 N4BP3O15049 544 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms