RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 NOLC1Q14978 699 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ZNF568Q3ZCX4 644 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 INTS8Q75QN2 995 aaKnown RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ZSCAN30Q86W11 494 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 CNGA4Q8IV77 575 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 KCNN1Q92952 543 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 SLC35C1Q96A29 364 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ERGIC2Q96RQ1 377 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 FDXACB1Q9BRP7 624 aaPredicted RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 FAM213AQ9BRX8 229 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 CRACR2AQ9BSW2 395 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 FAM207AQ9NSI2 230 aaPredicted RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 PRMT7Q9NVM4 692 aaPredicted RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 DMAC2Q9NW81 257 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 HDAC6Q9UBN7 1215 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 HTTP42858 3142 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 SMIM35A0A1B0GVV1 85 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 MBLAC1A4D2B0 266 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 TTLL13PA6NNM8 815 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 KIAA0391O15091 583 aaKnown RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 TREHO43280 583 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 EXTL3O43909 919 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 MSCO60682 206 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 N4BP1O75113 896 aaKnown RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 CSDE1O75534 798 aaKnown RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 ERLIN2O94905 339 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 MYCP01106 439 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 GNAT1P11488 350 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 CST5P28325 142 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 MXI1P50539 228 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 FXR1P51114 621 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 VAMP7P51809 220 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 NLRP11P59045 1033 aaKnown RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 CCZ1BP86790 482 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 CCZ1P86791 482 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 HIC1Q14526 733 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 HSP90AA2PQ14568 343 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 KIZQ2M2Z5 673 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 NBPF20Q3BBV1 942 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 ATF7IP2Q5U623 682 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 SLFN12LQ6IEE8 588 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 RNF180Q86T96 592 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 ZNF410Q86VK4 478 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 LRRC8AQ8IWT6 810 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 KIAA0319LQ8IZA0 1049 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 TC2NQ8N9U0 490 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 PCSK9Q8NBP7 692 aaKnown RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 CCDC112Q8NEF3 446 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 NEK11Q8NG66 645 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 DNAJB3Q8WWF6 145 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 CCDC127Q96BQ5 260 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 ZBTB45Q96K62 511 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 OSMRQ99650 979 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 TCHPQ9BT92 498 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 NFKBIZQ9BYH8 718 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 HAPLN2Q9GZV7 340 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 MINDY3Q9H8M7 445 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 IFT122Q9HBG6 1241 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 HMX1Q9NP08 348 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 TOPORSQ9NS56 1045 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 RBAKQ9NYW8 714 aaPredicted RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 AGO2Q9UKV8 859 aaKnown RBP7.53□□□□□ -1.2
PDAP1-203ENST00000488214 PYCARDQ9ULZ3 195 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 SIK3Q9Y2K2 1263 aa7.53□□□□□ -1.2
PDAP1-203ENST00000488214 TTC26A0AVF1 554 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 LRRIQ3A6PVS8 624 aaPredicted RBP7.52□□□□□ -1.21
PDAP1-203ENST00000488214 ESPNB1AK53 854 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 M0QZ92 97 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 ACKR2O00590 384 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 EPHB6O15197 1021 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 MAPK13O15264 365 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 CLDN3O15551 220 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 TSPAN1O60635 241 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 TOM1L1O75674 476 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 CLSTN1O94985 981 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 CTSHP09668 335 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 IQCF3P0C7M6 154 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 DLATP10515 647 aaKnown RBP7.52□□□□□ -1.21
PDAP1-203ENST00000488214 SKILP12757 684 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 FGFR4P22455 802 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 HOXC8P31273 242 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 GCLMP48507 274 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 FMO5P49326 533 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 ACOT2P49753 483 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 C1QTNF8P60827 252 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 DLG4P78352 724 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 NKX3-2P78367 333 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 APBA1Q02410 837 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 CYP24A1Q07973 514 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 KCNA10Q16322 511 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 EXOC3L4Q17RC7 722 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 SLC9C1Q4G0N8 1177 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 CBWD6Q4V339 395 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
PDAP1-203ENST00000488214 CBWD3Q5JTY5 395 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms