RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CLASP2O75122 1294 aaKnown RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 EFEMP2O95967 443 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 POMCP01189 267 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CTSAP10619 480 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 XRCC6P12956 609 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 AXLP30530 894 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 MLH1P40692 756 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 TRAPPC10P48553 1259 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 RNASELQ05823 741 aaKnown RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 DSC1Q08554 894 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 RABEP1Q15276 862 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PTPN14Q15678 1187 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ECM1Q16610 540 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 HERC4Q5GLZ8 1057 aaPredicted RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 DDX53Q86TM3 631 aaKnown RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CDR2LQ86X02 465 aaPredicted RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 RNF135Q8IUD6 432 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 RNF168Q8IYW5 571 aaPredicted RBP12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 VPS52Q8N1B4 723 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 MCPH1Q8NEM0 835 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 URGCPQ8TCY9 931 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CCDC113Q9H0I3 377 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 USP34Q70CQ2 3546 aa12.45□□□□□ -0.42
RAB11FIP3-210ENST00000487899 TSC2P49815 1807 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PRR33A8MZF0 331 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 F8W810 466 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 SRGAP2BP0DMP2 458 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ALADP13716 330 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 SCNN1GP51170 649 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 HAUS3Q68CZ6 603 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 MAEAQ7L5Y9 396 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 COLGALT2Q8IYK4 626 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 FAM184AQ8NB25 1140 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 GSTCDQ8NEC7 633 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 GAD1Q99259 594 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 TMEM175Q9BSA9 504 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 APOL5Q9BWW9 433 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 MYO15AQ9UKN7 3530 aa12.44□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CARNS1A5YM72 827 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 NPTXRO95502 500 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ITGA4P13612 1032 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 EPCAMP16422 314 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 FAM187BQ17R55 369 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 SLC27A1Q6PCB7 646 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PADI6Q6TGC4 694 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CASP10Q92851 521 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PRIMPOLQ96LW4 560 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 KIFC3Q9BVG8 833 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 NOL7Q9UMY1 257 aaKnown RBP12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ZDBF2Q9HCK1 2354 aa12.43□□□□□ -0.42
RAB11FIP3-210ENST00000487899 A0A1B0GUA9 196 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PP2D1A8MPX8 630 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 NRP1O14786 923 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 HOXB8P17481 243 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CYP11B2P19099 503 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 MUTP22033 750 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PTGDRQ13258 359 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 GNL2Q13823 731 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 IL17AQ16552 155 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 SLC22A17Q8WUG5 538 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 NACC1Q96RE7 527 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 HERC2P3Q9BVR0 1158 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 FZD8Q9H461 694 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 POMKQ9H5K3 350 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PDZD7Q9H5P4 517 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 UBN1Q9NPG3 1134 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PRMT7Q9NVM4 692 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 KANSL3Q9P2N6 904 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CACNG4Q9UBN1 327 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 PRG3Q9Y2Y8 225 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 HCN4Q9Y3Q4 1203 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 NOTCH4Q99466 2003 aa12.42□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ARHGEF35A5YM69 484 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 ST18O60284 1047 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 LILRB3O75022 631 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CXCL14O95715 111 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 SOD2P04179 222 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 AKAP5P24588 427 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CA8P35219 290 aa12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 CCT6AP40227 531 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP3-210ENST00000487899 NAMPTP43490 491 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms