RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 IGSF22Q8N9C0 903 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 DVL3Q92997 716 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-217ENST00000487825 GNRHR2Q96P88 292 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 LMF1Q96S06 567 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 CARD11Q9BXL7 1154 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 MRPL4Q9BYD3 311 aaKnown RBP6.43□□□□□ -1.38
BRCA1-217ENST00000487825 CELF4Q9BZC1 486 aaKnown RBP6.43□□□□□ -1.38
BRCA1-217ENST00000487825 BTBD7Q9P203 1132 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 MYRFQ9Y2G1 1151 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 COL6A3P12111 3177 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 ANKRD31Q8N7Z5 1873 aa6.43□□□□□ -1.38
BRCA1-217ENST00000487825 AKAP11Q9UKA4 1901 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 COL11A2P13942 1736 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-217ENST00000487825 CCDC163A0A0D9SF12 145 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 SOX10P56693 466 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 HERVK_113P62684 666 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 TOP3AQ13472 1001 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-217ENST00000487825 ZNF585AQ6P3V2 769 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 LRSAM1Q6UWE0 723 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 OVCH1Q7RTY7 1134 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 NOSTRINQ8IVI9 506 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 AMNQ9BXJ7 453 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 DEF6Q9H4E7 631 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 NCOA5Q9HCD5 579 aaKnown RBP6.42□□□□□ -1.38
BRCA1-217ENST00000487825 SLC4A7Q9Y6M7 1214 aa6.42□□□□□ -1.38
BRCA1-217ENST00000487825 SMG6Q86US8 1419 aaKnown RBP6.42□□□□□ -1.38
BRCA1-217ENST00000487825 CD163L1Q9NR16 1453 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 GYS1P13807 737 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 CHRNA5P30532 468 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 KCNQ1P51787 676 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 NOLC1Q14978 699 aaKnown RBP eCLIP6.41□□□□□ -1.38
BRCA1-217ENST00000487825 TMEM132BQ14DG7 1078 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 ZNF568Q3ZCX4 644 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 C2orf69Q8N8R5 385 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 HIPK4Q8NE63 616 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 DNERQ8NFT8 737 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 WDR48Q8TAF3 677 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 ASB15Q8WXK1 588 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 KLC2Q9H0B6 622 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 TRIM39Q9HCM9 518 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 CD248Q9HCU0 757 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 KCNH7Q9NS40 1196 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 CDC42EP3Q9UKI2 254 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 CGNL1Q0VF96 1302 aa6.41□□□□□ -1.38
BRCA1-217ENST00000487825 CENPJQ9HC77 1338 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-217ENST00000487825 SCN11AQ9UI33 1791 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 SLC12A8A0AV02 714 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 PRAMEF22A3QJZ6 481 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 FOXP2O15409 715 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 CA12O43570 354 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 CUTAO60888 179 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 MPIG6BO95866 241 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 ECE1P42892 770 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 ITPK1Q13572 414 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 TMEM177Q53S58 311 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 PALM2Q8IXS6 379 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 IP6K1Q92551 441 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 NEIL1Q96FI4 390 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-217ENST00000487825 WWC2-AS2Q96NR7 200 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 GBP4Q96PP9 640 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 ZDHHC5Q9C0B5 715 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 SEC61A2Q9H9S3 476 aa6.4□□□□□ -1.38
BRCA1-217ENST00000487825 PCDH11XQ9BZA7 1347 aa6.4□□□□□ -1.39
BRCA1-217ENST00000487825 PCDH11YQ9BZA8 1340 aa6.4□□□□□ -1.39
BRCA1-217ENST00000487825 KDRP35968 1356 aa6.4□□□□□ -1.39
BRCA1-217ENST00000487825 KTN1Q86UP2 1357 aaKnown RBP6.4□□□□□ -1.39
BRCA1-217ENST00000487825 RBBP6Q7Z6E9 1792 aaKnown RBP6.39□□□□□ -1.39
BRCA1-217ENST00000487825 PATE3B3GLJ2 98 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 ZNF623O75123 536 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 KRT37O76014 449 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 HMGCRP04035 888 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 ETV4P43268 484 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 FXR1P51114 621 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRCA1-217ENST00000487825 RAC3P60763 192 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 CD83Q01151 205 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 NFE2L2Q16236 605 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 RNF151Q2KHN1 245 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 OTOP2Q7RTS6 562 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 TAX1BP1Q86VP1 789 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 GIMAP8Q8ND71 665 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-217ENST00000487825 SH3RF3Q8TEJ3 882 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-217ENST00000487825 ERCC4Q92889 916 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-217ENST00000487825 MRFAP1L1Q96HT8 127 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 WNK4Q96J92 1243 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 CAPNS2Q96L46 248 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 CLUHP3Q96NS8 147 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 BTBD2Q9BX70 525 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 TAF1DQ9H5J8 278 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-217ENST00000487825 ZSWIM4Q9H7M6 989 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 KANSL2Q9H9L4 492 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 B3GALT1Q9Y5Z6 326 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 TJP1Q07157 1748 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 BCORQ6W2J9 1755 aa6.39□□□□□ -1.39
BRCA1-217ENST00000487825 BRCA2P51587 3418 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 PLD2O14939 933 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 MATN3O15232 486 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 FOXS1O43638 330 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 HIP1RO75146 1068 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 IRF9Q00978 393 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms