RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TRIP11Q15643 1979 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 UBE4BO95155 1302 aa14.61□□□□□ -0.07
COL4A6-207ENST00000487645 CITO14578 2027 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 TOM1L1O75674 476 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 KIF20AO95235 890 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 EOMESO95936 686 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 AMHP03971 560 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 EDN1P05305 212 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 PROZP22891 400 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 KCNJ6P48051 423 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 RAB27AP51159 221 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 WDR5P61964 334 aaKnown RBP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 BMT2Q1RMZ1 405 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 TMEM132AQ24JP5 1023 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 ZNF658Q5TYW1 1059 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 PRPF38BQ5VTL8 546 aaKnown RBP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 ERCC4Q92889 916 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 TOP1MTQ969P6 601 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 ADPGKQ9BRR6 497 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 TARS2Q9BW92 718 aaKnown RBP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 FGFBP2Q9BYJ0 223 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 PDZD7Q9H5P4 517 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 ELAC1Q9H777 363 aaKnown RBP14.6□□□□□ -0.07
COL4A6-207ENST00000487645 PTPRHQ9HD43 1115 aa14.6□□□□□ -0.07
COL4A6-207ENST00000487645 ZBBXA8MT70 800 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 PRPF6O94906 941 aaKnown RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 STAG3L1P0CL83 205 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 LIG4P49917 911 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 SNRPFP62306 86 aaKnown RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 SKOR2Q2VWA4 1001 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 DCAF4L1Q3SXM0 396 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 COBLL1Q53SF7 1204 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 UBXN11Q5T124 520 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 SLFN12LQ6IEE8 588 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 MRPL10Q7Z7H8 261 aaKnown RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 ECHDC2Q86YB7 292 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 MYOCDQ8IZQ8 938 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 CRIPAKQ8N1N5 446 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 TRIML1Q8N9V2 468 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 KIAA0895Q8NCT3 520 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 GLIS3Q8NEA6 775 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 SCFD1Q8WVM8 642 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 BICD1Q96G01 975 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 RNPC3Q96LT9 517 aaKnown RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 SLC9A7Q96T83 725 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 FAM105AQ9NUU6 356 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 CXXC1Q9P0U4 656 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 CGNQ9P2M7 1197 aaKnown RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 MAN1B1Q9UKM7 699 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 USP20Q9Y2K6 914 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 STYXL1Q9Y6J8 313 aa14.59□□□□□ -0.07
COL4A6-207ENST00000487645 FNDC1Q4ZHG4 1894 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-207ENST00000487645 A0A1W2PPC1 479 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 HNRNPDLO14979 420 aaKnown RBP14.58□□□□□ -0.08
COL4A6-207ENST00000487645 CLDN3O15551 220 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 MCF2P10911 925 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 HOXD13P35453 343 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 KCNA1Q09470 495 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 KNOP1Q1ED39 458 aaKnown RBP14.58□□□□□ -0.08
COL4A6-207ENST00000487645 KLHL40Q2TBA0 621 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 MPZL3Q6UWV2 235 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 ZNF598Q86UK7 904 aaKnown RBP14.58□□□□□ -0.08
COL4A6-207ENST00000487645 NPAS4Q8IUM7 802 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 TDHQ8IZJ6 230 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 GUF1Q8N442 669 aaKnown RBP14.58□□□□□ -0.08
COL4A6-207ENST00000487645 PGBD4Q96DM1 585 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 TCHPQ9BT92 498 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 TRIM6Q9C030 488 aaPredicted RBP14.58□□□□□ -0.08
COL4A6-207ENST00000487645 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 PCDHB7Q9Y5E2 793 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 PCDHB2Q9Y5E7 798 aa14.58□□□□□ -0.08
COL4A6-207ENST00000487645 GBF1Q92538 1859 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 A0A0B4J269 797 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 RBAK-RBAKDNI3L0D1 243 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 ABLIM1O14639 778 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 NPTXRO95502 500 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 PPP1R2P41236 205 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 DEFB103AP81534 67 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 MCL1Q07820 350 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 MORC3Q14149 939 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 KYAT1Q16773 422 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 CCDC183Q5T5S1 534 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 EEF1DP3Q658K8 133 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 RBM43Q6ZSC3 357 aaKnown RBP14.57□□□□□ -0.08
COL4A6-207ENST00000487645 HACE1Q8IYU2 909 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 SYAP1Q96A49 352 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-207ENST00000487645 ZBTB45Q96K62 511 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-207ENST00000487645 EIF2AQ9BY44 585 aaKnown RBP14.57□□□□□ -0.08
COL4A6-207ENST00000487645 GBP3Q9H0R5 595 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 UBN1Q9NPG3 1134 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 LRFN2Q9ULH4 789 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 GDAQ9Y2T3 454 aa14.57□□□□□ -0.08
COL4A6-207ENST00000487645 RANBP2P49792 3224 aaKnown RBP14.56□□□□□ -0.08
COL4A6-207ENST00000487645 ANKRD63C9JTQ0 380 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 ATP2A2P16615 1042 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms