RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 NR1I2O75469 434 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 FAM13AO94988 1023 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 PLS3P13797 630 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 IDEP14735 1019 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 CASP1P29466 404 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 CD52P31358 61 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 PHKA2P46019 1235 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
TOP3B-216ENST00000487485 PAK2Q13177 524 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-216ENST00000487485 COL19A1Q14993 1142 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 TIGD5Q53EQ6 642 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 ODR4Q5SWX8 454 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-216ENST00000487485 GRAMD1CQ8IYS0 662 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 DEPTORQ8TB45 409 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 NTPCRQ9BSD7 190 aaKnown RBP11.78□□□□□ -0.52
TOP3B-216ENST00000487485 NFKBIZQ9BYH8 718 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
TOP3B-216ENST00000487485 TRIM9Q9C026 710 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 KCNH6Q9H252 994 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 BLZF1Q9H2G9 400 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 MINDY3Q9H8M7 445 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 KMT5AQ9NQR1 393 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 LARSQ9P2J5 1176 aaKnown RBP11.78□□□□□ -0.52
TOP3B-216ENST00000487485 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 PADI3Q9ULW8 664 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 ST3GAL5Q9UNP4 418 aa11.78□□□□□ -0.52
TOP3B-216ENST00000487485 INO80B-WBP1J3KQ70 363 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 TRAK2O60296 914 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 UPP2O95045 317 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 FGFR4P22455 802 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 IRS1P35568 1242 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 LTBRP36941 435 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 NPTX2P47972 431 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 ZNF131P52739 623 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 SMTNP53814 917 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 CUL4BQ13620 913 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 CDCA2Q69YH5 1023 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-216ENST00000487485 KANK3Q6NY19 840 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 ADHFE1Q8IWW8 467 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 CCDC65Q8IXS2 484 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 TMEM192Q8IY95 271 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 SEPT8Q92599 483 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 APBB2Q92870 758 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 TOP1MTQ969P6 601 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 SNX27Q96L92 541 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 TIGD1Q96MW7 591 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 YME1L1Q96TA2 773 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 NSUN3Q9H649 340 aaKnown RBP11.77□□□□□ -0.53
TOP3B-216ENST00000487485 ERVK-5Q9HDB9 667 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 PANK4Q9NVE7 773 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 CLDND1Q9NY35 253 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 PRKAG3Q9UGI9 489 aa11.77□□□□□ -0.53
TOP3B-216ENST00000487485 CFAP54Q96N23 3096 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 K7ERI5 159 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 SLC16A4O15374 487 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
TOP3B-216ENST00000487485 MYL1P05976 194 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 GAP43P17677 238 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 SFPQP23246 707 aaKnown RBP eCLIP11.76□□□□□ -0.53
TOP3B-216ENST00000487485 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 ASIC1P78348 528 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 MBTD1Q05BQ5 628 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 DLX2Q07687 328 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-216ENST00000487485 CLUL1Q15846 466 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 HERC4Q5GLZ8 1057 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-216ENST00000487485 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 CCDC34Q96HJ3 373 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 MUTYHQ9UIF7 546 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 FAM50BQ9Y247 325 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 ADGRA3Q8IWK6 1321 aa11.76□□□□□ -0.53
TOP3B-216ENST00000487485 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-216ENST00000487485 PVALEFA0A1B0GWK0 134 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 FRMD3A2A2Y4 597 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 ERLIN2O94905 339 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 ZSCAN20P17040 1043 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-216ENST00000487485 EFNA5P52803 228 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 COASYQ13057 564 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 POSTNQ15063 836 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 PCBP1Q15365 356 aaKnown RBP eCLIP11.75□□□□□ -0.539e-6■■■□□ 18.2
TOP3B-216ENST00000487485 UNC13DQ70J99 1090 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 HAUS6Q7Z4H7 955 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 TMEM161BQ8NDZ6 487 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 MFSD14AQ96MC6 490 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 FTHL17Q9BXU8 183 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms