RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PCP11498 1178 aaKnown RBP13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 SLC26A2P50443 739 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 AFF1P51825 1210 aaKnown RBP13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 SCAPQ12770 1279 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 UAP1L1Q3KQV9 507 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 NPAS3Q8IXF0 933 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 CKAP2LQ8IYA6 745 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 GAB3Q8WWW8 586 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 DNASE1L2Q92874 299 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 PCDHGA5Q9Y5G8 931 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 SPAG17Q6Q759 2223 aa13.84□□□□□ -0.19
ATPAF1-205ENST00000487193 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 B4E1Z4 1266 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 MEIS2O14770 477 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 POMCP01189 267 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 DARSP14868 501 aaKnown RBP13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 CCNE1P24864 410 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 OR1G1P47890 313 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 DSG1Q02413 1049 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 FAM160B1Q5W0V3 765 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 PDXDC2PQ6P474 469 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 Q6ZS52 159 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 ZNF605Q86T29 641 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 MAP7D2Q96T17 732 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 HCFC1R1Q9NWW0 138 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 MARCH5Q9NX47 278 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
ATPAF1-205ENST00000487193 DDX39AO00148 427 aaKnown RBP13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 MAFGO15525 162 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 C1QL1O75973 258 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 ATG7O95352 703 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 ATP4AP20648 1035 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 PTGDRQ13258 359 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 SWSAP1Q6NVH7 229 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 CHCHD4Q8N4Q1 142 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 TMEM9BQ9NQ34 198 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 KCNH7Q9NS40 1196 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 ZSWIM5Q9P217 1185 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 RAI2Q9Y5P3 530 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 SHROOM3Q8TF72 1996 aa13.82□□□□□ -0.2
ATPAF1-205ENST00000487193 IGKV6D-21A0A0A0MT36 114 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 SPAARA0A1B0GVQ0 90 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 F8W810 466 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 CYTH3O43739 400 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 CAVIN2O95810 425 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 SKIP12755 728 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 CREB5Q02930 508 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 IFIT1BQ5T764 474 aaKnown RBP13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 CCDC60Q8IWA6 550 aaPredicted RBP13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 TRMT61BQ9BVS5 477 aaKnown RBP13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 ZNF334Q9HCZ1 680 aaPredicted RBP13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 CHST12Q9NRB3 414 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 FAM105AQ9NUU6 356 aa13.81□□□□□ -0.2
ATPAF1-205ENST00000487193 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 LNP1A1A4G5 178 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 XYLBO75191 536 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 C1RP00736 705 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 HNRNPA1P09651 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 TMOD1P28289 359 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 GPC3P51654 580 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 SIM1P81133 766 aaPredicted RBP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 LRRC32Q14392 662 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 POTEHQ6S545 545 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 ABHD15Q6UXT9 468 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 IRF7Q92985 503 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 ELSPBP1Q96BH3 223 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 FNIP2Q9P278 1114 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 DNMT3BQ9UBC3 853 aaKnown RBP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 MRPS23Q9Y3D9 190 aaKnown RBP13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 NFASCO94856 1347 aa13.8□□□□□ -0.2
ATPAF1-205ENST00000487193 F5P12259 2224 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 CDX4O14627 284 aaPredicted RBP13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 ZNF213O14771 459 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 CCNE2O96020 404 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 C8AP07357 584 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 GDI1P31150 447 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 ITGB3BPQ13352 177 aaPredicted RBP13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 AGMOQ6ZNB7 445 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 RNF168Q8IYW5 571 aaPredicted RBP13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 PI4K2BQ8TCG2 481 aa13.79□□□□□ -0.2
ATPAF1-205ENST00000487193 SLC39A7Q92504 469 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms