RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 C6orf50Q9HD87 102 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.74■□□□□ 0.27
PFDN4-204ENST00000487129 CNTNAP2Q9UHC6 1331 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 PATJQ8NI35 1801 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 NCLP19338 710 aaKnown RBP16.73■□□□□ 0.27
PFDN4-204ENST00000487129 DNM2P50570 870 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 GET4Q7L5D6 327 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-204ENST00000487129 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 HDAC7Q8WUI4 952 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 TEKT3Q9BXF9 490 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 KANSL3Q9P2N6 904 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 MTF2Q9Y483 593 aaPredicted RBP16.73■□□□□ 0.27
PFDN4-204ENST00000487129 NID2Q14112 1375 aa16.73■□□□□ 0.27
PFDN4-204ENST00000487129 TGM5O43548 720 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 KINO60870 393 aaKnown RBP16.72■□□□□ 0.27
PFDN4-204ENST00000487129 C1RP00736 705 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 GPC5P78333 572 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 ZNF528Q3MIS6 628 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 PLA2G4FQ68DD2 849 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 ZNF579Q8NAF0 562 aaKnown RBP16.72■□□□□ 0.27
PFDN4-204ENST00000487129 NELL1Q92832 810 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 FGF14Q92915 247 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 B3GALT6Q96L58 329 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 PRKD2Q9BZL6 878 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 PLEKHA4Q9H4M7 779 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 MIOSQ9NXC5 875 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 ZDHHC7Q9NXF8 308 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 DPP7Q9UHL4 492 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 SSX2IPQ9Y2D8 614 aa16.72■□□□□ 0.27
PFDN4-204ENST00000487129 DOCK6Q96HP0 2047 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
PFDN4-204ENST00000487129 TGM1P22735 817 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 GNA11P29992 359 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 USP11P51784 963 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 ATXN1P54253 815 aaKnown RBP16.71■□□□□ 0.27
PFDN4-204ENST00000487129 TSGA10IPQ3SY00 556 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 VARS2Q5ST30 1063 aaKnown RBP16.71■□□□□ 0.27
PFDN4-204ENST00000487129 PARM1Q6UWI2 310 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 PALB2Q86YC2 1186 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 ETNPPLQ8TBG4 499 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 FAM193BQ96PV7 902 aaPredicted RBP16.71■□□□□ 0.27
PFDN4-204ENST00000487129 GPR62Q9BZJ7 368 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.27
PFDN4-204ENST00000487129 CFAP47Q6ZTR5 3102 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 MAP1BP46821 2468 aaKnown RBP16.7■□□□□ 0.26
PFDN4-204ENST00000487129 ARL5CA6NH57 179 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 OR1G1P47890 313 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 NPEPPSP55786 919 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 NTRK3Q16288 839 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 Q4G0T1 1027 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 ZBTB44Q8NCP5 570 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 GSTCDQ8NEC7 633 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 CCDC12Q8WUD4 166 aaPredicted RBP16.7■□□□□ 0.26
PFDN4-204ENST00000487129 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 GAD1Q99259 594 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
PFDN4-204ENST00000487129 DHX33Q9H6R0 707 aaKnown RBP16.7■□□□□ 0.26
PFDN4-204ENST00000487129 FNIP2Q9P278 1114 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 WRAP73Q9P2S5 460 aaPredicted RBP16.7■□□□□ 0.26
PFDN4-204ENST00000487129 FBXO4Q9UKT5 387 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 MYH15Q9Y2K3 1946 aa16.7■□□□□ 0.26
PFDN4-204ENST00000487129 MTCL1Q9Y4B5 1905 aaKnown RBP16.7■□□□□ 0.26
PFDN4-204ENST00000487129 CHD8Q9HCK8 2581 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 MIA3Q5JRA6 1907 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 CYP3A7-CYP3A51PA0A087WV96 503 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 KANSL1LA0AUZ9 987 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 DDX11L8A8MPP1 907 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 SPTLC1O15269 473 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 GAS2O43903 313 aaKnown RBP16.69■□□□□ 0.26
PFDN4-204ENST00000487129 LILRB5O75023 590 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 ZMYND10O75800 440 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 TDP2O95551 362 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 RPL17P18621 184 aaKnown RBP16.69■□□□□ 0.26
PFDN4-204ENST00000487129 CYP3A7P24462 503 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 MLH1P40692 756 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 SNW1Q13573 536 aaKnown RBP16.69■□□□□ 0.26
PFDN4-204ENST00000487129 ELMSAN1Q6PJG2 1045 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 SRGAP1Q7Z6B7 1085 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 GPR65Q8IYL9 337 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 PRPF31Q8WWY3 499 aaKnown RBP16.69■□□□□ 0.26
PFDN4-204ENST00000487129 PHKBQ93100 1093 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 PIDD1Q9HB75 910 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 HES2Q9Y543 173 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 IPPQ9Y573 584 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 PCDHGA2Q9Y5H1 932 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 USP24Q9UPU5 2620 aa16.69■□□□□ 0.26
PFDN4-204ENST00000487129 SHISA7A6NL88 538 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 EML1O00423 815 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 SCNN1GP51170 649 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 NTHL1P78549 312 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 MLF2Q15773 248 aaPredicted RBP16.68■□□□□ 0.26
PFDN4-204ENST00000487129 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 TBCKQ8TEA7 893 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 EPC1Q9H2F5 836 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 VPS54Q9P1Q0 977 aa16.68■□□□□ 0.26
PFDN4-204ENST00000487129 CDH7Q9ULB5 785 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms