RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 CLLU1OSQ5K130 101 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 C1orf186Q6ZWK4 172 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 PDILTQ8N807 584 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 SYT2Q8N9I0 419 aaPredicted RBP11.26□□□□□ -0.61
NEK4-204ENST00000487068 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 RAD54LQ92698 747 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 CCDC51Q96ER9 411 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
NEK4-204ENST00000487068 CCSER1Q9C0I3 900 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 RSAD1Q9HA92 442 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 KCND2Q9NZV8 630 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 CFAP45Q9UL16 551 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
NEK4-204ENST00000487068 TRANK1O15050 2925 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 NPHP3-ACAD11A0A0J9YXS1 232 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 H3BNC9 293 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 K7ENM7 598 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 K7ERI5 159 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 N4BP3O15049 544 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 SLC16A4O15374 487 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 ZC3H11AO75152 810 aaKnown RBP eCLIP11.25□□□□□ -0.61
NEK4-204ENST00000487068 PPP6R2O75170 966 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 RB1P06400 928 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 POU3F3P20264 500 aaPredicted RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 CA8P35219 290 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 BMPR1AP36894 532 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 MATR3P43243 847 aaKnown RBP eCLIP11.25□□□□□ -0.61
NEK4-204ENST00000487068 NPTX2P47972 431 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 FAM189BP81408 668 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 STRN3Q13033 797 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 TIGD5Q53EQ6 642 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 CCDC73Q6ZRK6 1079 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 APBB1IPQ7Z5R6 666 aaPredicted RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 ZNF598Q86UK7 904 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 CRIPAKQ8N1N5 446 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 COLGALT1Q8NBJ5 622 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 CNNM3Q8NE01 707 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 BICD1Q96G01 975 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 ZNF558Q96NG5 402 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 FAM193BQ96PV7 902 aaPredicted RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 RPS6KC1Q96S38 1066 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 REEP2Q9BRK0 252 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 TYW1Q9NV66 732 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 LARSQ9P2J5 1176 aaKnown RBP11.25□□□□□ -0.61
NEK4-204ENST00000487068 COG5Q9UP83 839 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 HES2Q9Y543 173 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 IPPQ9Y573 584 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 MTCH2Q9Y6C9 303 aa11.25□□□□□ -0.61
NEK4-204ENST00000487068 MEIS3P2A8K0S8 358 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 C5orf67F2Z3F1 127 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 CUTAO60888 179 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 HARSP12081 509 aaKnown RBP11.24□□□□□ -0.61
NEK4-204ENST00000487068 PLS3P13797 630 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
NEK4-204ENST00000487068 PBX3P40426 434 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 MLH1P40692 756 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 KRT85P78386 507 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 AMHR2Q16671 573 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 ZNF568Q3ZCX4 644 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 TMEM31Q5JXX7 168 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 UBXN11Q5T124 520 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 ATL3Q6DD88 541 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 DYMQ7RTS9 669 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 DAW1Q8N136 415 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 MYCT1Q8N699 235 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 KLHL23Q8NBE8 558 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 MRPL38Q96DV4 380 aaKnown RBP11.24□□□□□ -0.61
NEK4-204ENST00000487068 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 TRAIPQ9BWF2 469 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 PLVAPQ9BX97 442 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 C17orf75Q9HAS0 396 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 BLOC1S4Q9NUP1 217 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 USP20Q9Y2K6 914 aa11.24□□□□□ -0.61
NEK4-204ENST00000487068 BRWD1Q9NSI6 2320 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms