RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 CUEDC2Q9H467 287 aa14.46□□□□□ -0.09
NR1H3-223ENST00000486991 DHX33Q9H6R0 707 aaKnown RBP14.46□□□□□ -0.09
NR1H3-223ENST00000486991 CYP26B1Q9NR63 512 aa14.46□□□□□ -0.09
NR1H3-223ENST00000486991 C1orf112Q9NSG2 853 aa14.46□□□□□ -0.09
NR1H3-223ENST00000486991 ANKEF1Q9NU02 776 aa14.46□□□□□ -0.09
NR1H3-223ENST00000486991 AKT3Q9Y243 479 aa14.46□□□□□ -0.09
NR1H3-223ENST00000486991 SLFN14P0C7P3 912 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 FGFR1P11362 822 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 DARSP14868 501 aaKnown RBP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 EIF4BP23588 611 aaKnown RBP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 AFMP43652 599 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 SARSP49591 514 aaKnown RBP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 MRE11P49959 708 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 DNM2P50570 870 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 ERVFC1P60507 584 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 HERC4Q5GLZ8 1057 aaPredicted RBP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 EXOC8Q8IYI6 725 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 MICAL1Q8TDZ2 1067 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 STAMQ92783 540 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 CCDC34Q96HJ3 373 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 CEP170P1Q96L14 293 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 PHOX2BQ99453 314 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 RGS18Q9NS28 235 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 RNF19AQ9NV58 838 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 DBR1Q9UK59 544 aaKnown RBP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 USP15Q9Y4E8 981 aaPredicted RBP14.45□□□□□ -0.1
NR1H3-223ENST00000486991 PCDHB7Q9Y5E2 793 aa14.45□□□□□ -0.1
NR1H3-223ENST00000486991 DENND3A2RUS2 1198 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 RARRES1P49788 294 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 SLC12A3P55017 1021 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 FAM189BP81408 668 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 SKOR2Q2VWA4 1001 aaPredicted RBP14.44□□□□□ -0.1
NR1H3-223ENST00000486991 KANK3Q6NY19 840 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 GPBP1Q86WP2 473 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 GRAMD1CQ8IYS0 662 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 SYT2Q8N9I0 419 aaPredicted RBP14.44□□□□□ -0.1
NR1H3-223ENST00000486991 TIGD1Q96MW7 591 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 POP1Q99575 1024 aaKnown RBP14.44□□□□□ -0.1
NR1H3-223ENST00000486991 TLE6Q9H808 572 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 MAGEF1Q9HAY2 307 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 XPNPEP1Q9NQW7 623 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 BMP2KQ9NSY1 1161 aaPredicted RBP14.44□□□□□ -0.1
NR1H3-223ENST00000486991 TYW1Q9NV66 732 aaKnown RBP14.44□□□□□ -0.1
NR1H3-223ENST00000486991 PPME1Q9Y570 386 aa14.44□□□□□ -0.1
NR1H3-223ENST00000486991 TECTAO75443 2155 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 USO1O60763 962 aaKnown RBP14.43□□□□□ -0.1
NR1H3-223ENST00000486991 CSDE1O75534 798 aaKnown RBP14.43□□□□□ -0.1
NR1H3-223ENST00000486991 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
NR1H3-223ENST00000486991 FGFR4P22455 802 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 AMPD3Q01432 767 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 IER5LQ5T953 404 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 PADI6Q6TGC4 694 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 SLC24A5Q71RS6 500 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 KSR1Q8IVT5 923 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 SMRP1Q8NCR6 262 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 EDAQ92838 391 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 PAGE5Q96GU1 130 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 SCLT1Q96NL6 688 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 APOL5Q9BWW9 433 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 TNMDQ9H2S6 317 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 CWH43Q9H720 699 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 IFT122Q9HBG6 1241 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 PIEZO1Q92508 2521 aa14.43□□□□□ -0.1
NR1H3-223ENST00000486991 A0A087WZ62 844 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 LOC730098B7Z3J9 87 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 TRAK2O60296 914 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 FGF18O76093 207 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 ZSCAN20P17040 1043 aaPredicted RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 ATF7P17544 494 aaPredicted RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 PBX3P40426 434 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 POLGP54098 1239 aaPredicted RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 RAD51AP2Q09MP3 1159 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 COASYQ13057 564 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 EMC2Q15006 297 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 CAMK4Q16566 473 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 KLHL40Q2TBA0 621 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 RINT1Q6NUQ1 792 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 LRRC55Q6ZSA7 311 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 COLGALT1Q8NBJ5 622 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 FDXACB1Q9BRP7 624 aaPredicted RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 RUSC1Q9BVN2 902 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 INO80BQ9C086 356 aaPredicted RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 BLZF1Q9H2G9 400 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 CLSTN2Q9H4D0 955 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 KBTBD4Q9NVX7 518 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 SUCLA2Q9P2R7 463 aaPredicted RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 CDH22Q9UJ99 828 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 HOOK1Q9UJC3 728 aaKnown RBP14.42□□□□□ -0.1
NR1H3-223ENST00000486991 PCDHB12Q9Y5F1 795 aa14.42□□□□□ -0.1
NR1H3-223ENST00000486991 ZNF318Q5VUA4 2279 aa14.41□□□□□ -0.1
NR1H3-223ENST00000486991 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
NR1H3-223ENST00000486991 TMEM221A6NGB7 291 aa14.41□□□□□ -0.1
NR1H3-223ENST00000486991 MYMKA6NI61 221 aa14.41□□□□□ -0.1
NR1H3-223ENST00000486991 M0R296 226 aa14.41□□□□□ -0.1
NR1H3-223ENST00000486991 HOXA2O43364 376 aa14.41□□□□□ -0.1
NR1H3-223ENST00000486991 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms