RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GGPS1O95749 300 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 CFBP00751 764 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ALBP02768 609 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 CTSHP09668 335 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 SMIM10L2AP0DMW4 78 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 SMIM10L2BP0DMW5 78 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 MYCLP12524 364 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 NDUFV1P49821 464 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 NT5C2P49902 561 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ZXDAP98168 799 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 TAGLNQ01995 201 aaKnown RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 DLX2Q07687 328 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 RAD51AP2Q09MP3 1159 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ADAM15Q13444 863 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 GNL2Q13823 731 aaKnown RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 HSDL1Q3SXM5 330 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ASPRV1Q53RT3 343 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 VPS53Q5VIR6 699 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 DGKHQ86XP1 1220 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ADGRF4Q8IZF3 695 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 SAMD3Q8N6K7 520 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ZNF417Q8TAU3 575 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 PI4K2BQ8TCG2 481 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ESR2Q92731 530 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 ZNF587Q96SQ5 575 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 C16orf70Q9BSU1 422 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 USP26Q9BXU7 913 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 OSBPL2Q9H1P3 480 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 RNPEPQ9H4A4 650 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 RETREG1Q9H6L5 497 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 TYW1Q9NV66 732 aaKnown RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 RBM28Q9NW13 759 aaKnown RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 TBX10O75333 385 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 FOSP01100 380 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-209ENST00000486618 MMP1P03956 469 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 GRNP28799 593 aaKnown RBP7.7□□□□□ -1.18
HDAC3-209ENST00000486618 HOXC8P31273 242 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 SIGLEC14Q08ET2 396 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 TCF15Q12870 199 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 TRAF1Q13077 416 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 BTG3Q14201 252 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-209ENST00000486618 QRICH1Q2TAL8 776 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 MCMDC2Q4G0Z9 681 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 FAM26DQ5JW98 314 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ODR4Q5SWX8 454 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 VSIG10LQ86VR7 867 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 IQCA1Q86XH1 822 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 CCDC89Q8N998 374 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 VPS37AQ8NEZ2 397 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ATOH1Q92858 354 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-209ENST00000486618 CLP1Q92989 425 aaKnown RBP7.7□□□□□ -1.18
HDAC3-209ENST00000486618 P2RX5Q93086 422 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 PDCD2LQ9BRP1 358 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 AMNQ9BXJ7 453 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 CPVLQ9H3G5 476 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 KAT14Q9H8E8 782 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 CAPN10Q9HC96 672 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 VAT1LQ9HCJ6 419 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 PRDM4Q9UKN5 801 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ZNF215Q9UL58 517 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ODF2LQ9ULJ1 636 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ZMYM6O95789 1325 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 CCDC171Q6TFL3 1326 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ADGRA3Q8IWK6 1321 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 ATG2AQ2TAZ0 1938 aa7.7□□□□□ -1.18
HDAC3-209ENST00000486618 FSD2A1L4K1 749 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 LOC730098B7Z3J9 87 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 LINC01565O15544 149 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 SORBS3O60504 671 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 LGALS2P05162 132 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 PARP1P09874 1014 aaKnown RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 MX1P20591 662 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 UBA1P22314 1058 aaKnown RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 CCND2P30279 289 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 HSD17B4P51659 736 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 RRP1P56182 461 aaKnown RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 HAND2P61296 217 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 GHRHRQ02643 423 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 COASYQ13057 564 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 COL9A3Q14050 684 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 ELOAQ14241 798 aaKnown RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 NEDD9Q14511 834 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 CBX2Q14781 532 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 BRD3Q15059 726 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 PGM5Q15124 567 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 SWI5Q1ZZU3 235 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 GNPTABQ3T906 1256 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 C8orf86Q6ZUL3 223 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 STOX1Q6ZVD7 989 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 RSPH3Q86UC2 560 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 EFHBQ8N7U6 833 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 SMRP1Q8NCR6 262 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 STK32AQ8WU08 396 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 MYO19Q96H55 970 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 MSLNLQ96KJ4 702 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 PHF7Q9BWX1 381 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 GSX2Q9BZM3 304 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 TMX1Q9H3N1 280 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 ALG13Q9NP73 1137 aaKnown RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 SETD4Q9NVD3 440 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms