RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 PPP2R2DQ66LE6 453 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
C9orf16-202ENST00000486420 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 LRRC43Q8N309 656 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 TMEM161BQ8NDZ6 487 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 PLVAPQ9BX97 442 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 PBX4Q9BYU1 374 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 MRPL44Q9H9J2 332 aaKnown RBP13.61□□□□□ -0.23
C9orf16-202ENST00000486420 RMND1Q9NWS8 449 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
C9orf16-202ENST00000486420 GIT1Q9Y2X7 761 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 SIP14410 1827 aa13.61□□□□□ -0.23
C9orf16-202ENST00000486420 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 MYMKA6NI61 221 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 SLC16A4O15374 487 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 CLDN3O15551 220 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 UPP2O95045 317 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 SMC2O95347 1197 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 PIGRP01833 764 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 MCF2P10911 925 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 ITGA4P13612 1032 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 PPM1AP35813 382 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 DYMQ7RTS9 669 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 CRIPAKQ8N1N5 446 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 BSNDQ8WZ55 320 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 ZNF689Q96CS4 500 aaPredicted RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 DNAJC19Q96DA6 116 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 BICD1Q96G01 975 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 ZNF668Q96K58 619 aaPredicted RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 TGS1Q96RS0 853 aaKnown RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 CDX2Q99626 313 aaPredicted RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 TCHPQ9BT92 498 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
C9orf16-202ENST00000486420 TBX20Q9UMR3 447 aa13.6□□□□□ -0.23
C9orf16-202ENST00000486420 HNRNPDLO14979 420 aaKnown RBP13.59□□□□□ -0.23
C9orf16-202ENST00000486420 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
C9orf16-202ENST00000486420 ZNF202O95125 648 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 LAG3P18627 525 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 PPP1R2P41236 205 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 LIG4P49917 911 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 NDUFA8P51970 172 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 BMS1Q14692 1282 aaKnown RBP13.59□□□□□ -0.23
C9orf16-202ENST00000486420 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 MAP4K3Q8IVH8 894 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 GOLGA5Q8TBA6 731 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 ACCSQ96QU6 501 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 ACO2Q99798 780 aaKnown RBP13.59□□□□□ -0.23
C9orf16-202ENST00000486420 EXOC1Q9NV70 894 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 PCDHB12Q9Y5F1 795 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 MYO9BQ13459 2157 aa13.59□□□□□ -0.23
C9orf16-202ENST00000486420 TTC3P53804 2025 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 A0A087X0B3 334 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 INPPL1O15357 1258 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
C9orf16-202ENST00000486420 MGEA5O60502 916 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 CSDE1O75534 798 aaKnown RBP13.58□□□□□ -0.24
C9orf16-202ENST00000486420 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
C9orf16-202ENST00000486420 CA3P07451 260 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 FOSL2P15408 326 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 PTMSP20962 102 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 FGFR4P22455 802 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 ERVK-21P61565 698 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 ZNF568Q3ZCX4 644 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
C9orf16-202ENST00000486420 CD302Q8IX05 232 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 MYLIPQ8WY64 445 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 CLP1Q92989 425 aaKnown RBP13.58□□□□□ -0.24
C9orf16-202ENST00000486420 P2RX5Q93086 422 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 PAGE5Q96GU1 130 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 RPS6KC1Q96S38 1066 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 C11orf84Q9BUA3 381 aaPredicted RBP13.58□□□□□ -0.24
C9orf16-202ENST00000486420 LMAN2LQ9H0V9 348 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 ZNF576Q9H609 170 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 RSAD1Q9HA92 442 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 LMCD1Q9NZU5 365 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 SERTAD1Q9UHV2 236 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.24
C9orf16-202ENST00000486420 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 GCNT3O95395 438 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 LIG1P18858 919 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 PBX2P40425 430 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.24
C9orf16-202ENST00000486420 UBE3AQ05086 875 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
C9orf16-202ENST00000486420 KCNB1Q14721 858 aa13.57□□□□□ -0.24
C9orf16-202ENST00000486420 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms