RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 HOXA2O43364 376 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 SLFN14P0C7P3 912 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 TAP1Q03518 808 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
HPS4-214ENST00000485842 NT5DC1Q5TFE4 455 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
HPS4-214ENST00000485842 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 DEFB123Q8N688 67 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
HPS4-214ENST00000485842 BICD1Q96G01 975 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
HPS4-214ENST00000485842 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
HPS4-214ENST00000485842 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
HPS4-214ENST00000485842 ZNF576Q9H609 170 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 MTUS1Q9ULD2 1270 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 INPP5FQ9Y2H2 1132 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 IPPQ9Y573 584 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 ZNF202O95125 648 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 EOMESO95936 686 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
HPS4-214ENST00000485842 ITGA4P13612 1032 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 COASYQ13057 564 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 ZNF568Q3ZCX4 644 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
HPS4-214ENST00000485842 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
HPS4-214ENST00000485842 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
HPS4-214ENST00000485842 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
HPS4-214ENST00000485842 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 C7orf25Q9BPX7 421 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 TMEM117Q9H0C3 514 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
HPS4-214ENST00000485842 ANKFY1Q9P2R3 1169 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 HES2Q9Y543 173 aa13.01□□□□□ -0.33
HPS4-214ENST00000485842 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
HPS4-214ENST00000485842 COL4A4P53420 1690 aaPredicted RBP13□□□□□ -0.33
HPS4-214ENST00000485842 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
HPS4-214ENST00000485842 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
HPS4-214ENST00000485842 ZNF623O75123 536 aa13□□□□□ -0.33
HPS4-214ENST00000485842 GADD45BO75293 160 aaPredicted RBP13□□□□□ -0.33
HPS4-214ENST00000485842 GCNT3O95395 438 aa13□□□□□ -0.33
HPS4-214ENST00000485842 MATR3P43243 847 aaKnown RBP eCLIP13□□□□□ -0.33
HPS4-214ENST00000485842 CUL4BQ13620 913 aa13□□□□□ -0.33
HPS4-214ENST00000485842 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
HPS4-214ENST00000485842 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
HPS4-214ENST00000485842 GLB1LQ6UWU2 654 aa13□□□□□ -0.33
HPS4-214ENST00000485842 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
HPS4-214ENST00000485842 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
HPS4-214ENST00000485842 ZBTB33Q86T24 672 aa13□□□□□ -0.33
HPS4-214ENST00000485842 HACE1Q8IYU2 909 aa13□□□□□ -0.33
HPS4-214ENST00000485842 SLC17A8Q8NDX2 589 aa13□□□□□ -0.33
HPS4-214ENST00000485842 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
HPS4-214ENST00000485842 PAGE5Q96GU1 130 aa13□□□□□ -0.33
HPS4-214ENST00000485842 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
HPS4-214ENST00000485842 ACO2Q99798 780 aaKnown RBP13□□□□□ -0.33
HPS4-214ENST00000485842 C17orf80Q9BSJ5 609 aa13□□□□□ -0.33
HPS4-214ENST00000485842 TCHPQ9BT92 498 aa13□□□□□ -0.33
HPS4-214ENST00000485842 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
HPS4-214ENST00000485842 RSAD1Q9HA92 442 aa13□□□□□ -0.33
HPS4-214ENST00000485842 HCSTQ9UBK5 93 aa13□□□□□ -0.33
HPS4-214ENST00000485842 PARP2Q9UGN5 583 aa13□□□□□ -0.33
HPS4-214ENST00000485842 TBX20Q9UMR3 447 aa13□□□□□ -0.33
HPS4-214ENST00000485842 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
HPS4-214ENST00000485842 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
HPS4-214ENST00000485842 AKAP5P24588 427 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 CTNNB1P35222 781 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 MLH1P40692 756 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 LIG4P49917 911 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 CASP5P51878 434 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 AGMOQ6ZNB7 445 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 UNC13DQ70J99 1090 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
HPS4-214ENST00000485842 LRRC43Q8N309 656 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 CDT1Q9H211 546 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 PRDM12Q9H4Q4 367 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 OLFML3Q9NRN5 406 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
HPS4-214ENST00000485842 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
HPS4-214ENST00000485842 LAMA2P24043 3122 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms