RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ATF7P17544 494 aaPredicted RBP17■□□□□ 0.31
RPUSD3-217ENST00000485705 SARSP49591 514 aaKnown RBP17■□□□□ 0.31
RPUSD3-217ENST00000485705 RABGGTBP53611 331 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 STK4Q13043 487 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 CAMK4Q16566 473 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 FNDC1Q4ZHG4 1894 aaPredicted RBP17■□□□□ 0.31
RPUSD3-217ENST00000485705 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
RPUSD3-217ENST00000485705 MAP4K3Q8IVH8 894 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 ELOA2Q8IYF1 753 aaPredicted RBP17■□□□□ 0.31
RPUSD3-217ENST00000485705 CRIPAKQ8N1N5 446 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 KIAA0895Q8NCT3 520 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 TOP1MTQ969P6 601 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 SLC9A7Q96T83 725 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 PCDHB2Q9Y5E7 798 aa17■□□□□ 0.31
RPUSD3-217ENST00000485705 MEIS3P2A8K0S8 358 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 TISP43B9A030 160 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 ABLIM1O14639 778 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 N4BP3O15049 544 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 HOXD13P35453 343 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 GATMP50440 423 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 SLC39A4Q6P5W5 647 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 HERC6Q8IVU3 1022 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 PHOSPHO2Q8TCD6 241 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 LPPQ93052 612 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 BICD1Q96G01 975 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 TNFSF13BQ9Y275 285 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 HES2Q9Y543 173 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 PCDHB7Q9Y5E2 793 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
RPUSD3-217ENST00000485705 CITO14578 2027 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 RHOBTB3O94955 611 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 PIGRP01833 764 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 MYOGP15173 224 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 KCNB1Q14721 858 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 SLC27A1Q6PCB7 646 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 NPAS4Q8IUM7 802 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 SPATA20Q8TB22 786 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 HVCN1Q96D96 273 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 ACCSQ96QU6 501 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 CDT1Q9H211 546 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 CLSTN2Q9H4D0 955 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 RNF19AQ9NV58 838 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 HOOK1Q9UJC3 728 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 GDAQ9Y2T3 454 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 IPPQ9Y573 584 aa16.98■□□□□ 0.31
RPUSD3-217ENST00000485705 COL4A6Q14031 1691 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 A0A1W2PPC1 479 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 HNRNPDLO14979 420 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ZNF623O75123 536 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 SMC2O95347 1197 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 GJB5O95377 273 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 FGFR1P11362 822 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 SCP2P22307 547 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 PROZP22891 400 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 PBX2P40425 430 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 LIG4P49917 911 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 PSMD2Q13200 908 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ALCAMQ13740 583 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ZNF568Q3ZCX4 644 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ISM2Q6H9L7 571 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 MRPL10Q7Z7H8 261 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 NELFCDQ8IXH7 590 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ZNF507Q8TCN5 953 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ELAC1Q9H777 363 aaKnown RBP16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 TMEM161AQ9NX61 479 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 ANKFY1Q9P2R3 1169 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 MAN1B1Q9UKM7 699 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 LRFN2Q9ULH4 789 aa16.97■□□□□ 0.31
RPUSD3-217ENST00000485705 EIF3DO15371 548 aaKnown RBP eCLIP16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 TOM1L1O75674 476 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 STAG3L1P0CL83 205 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 ABCD1P33897 745 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 RAB27AP51159 221 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 MPZL3Q6UWV2 235 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 SMYD4Q8IYR2 804 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 CEP120Q8N960 986 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms