RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ACO2Q99798 780 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 NOC4LQ9BVI4 516 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 SEZ6LQ9BYH1 1024 aa22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 RTN4Q9NQC3 1192 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 INTS13Q9NVM9 706 aa22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 ARMCX3Q9UH62 379 aaPredicted RBP22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 USP20Q9Y2K6 914 aa22.35■■□□□ 1.17
VCPKMT-203ENST00000484763 KIAA0391O15091 583 aaKnown RBP22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 TOM1L1O75674 476 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 IQCF3P0C7M6 154 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 NR1I3Q14994 352 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 TRIM59Q8IWR1 403 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 OSMRQ99650 979 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 ANKFY1Q9P2R3 1169 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 NOD1Q9Y239 953 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 CNTNAP2Q9UHC6 1331 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 M0QZ92 97 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 TSHZ1Q6ZSZ6 1077 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 RPAINQ86UA6 219 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 CRISPLD2Q9H0B8 497 aa22.34■■□□□ 1.17
VCPKMT-203ENST00000484763 TTLL13PA6NNM8 815 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 LGALS16A8MUM7 142 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 MAPK13O15264 365 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 B4GALT5O43286 388 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 CSDE1O75534 798 aaKnown RBP22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 ERLIN2O94905 339 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 MATR3P43243 847 aaKnown RBP eCLIP22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 MRPS6P82932 125 aaKnown RBP22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 PTK7Q13308 1070 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 PCBP1Q15365 356 aaKnown RBP eCLIP22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 AMHR2Q16671 573 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 TMEM132AQ24JP5 1023 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 MIIPQ5JXC2 388 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 ATF7IP2Q5U623 682 aa22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 U2AF1L4Q8WU68 220 aaKnown RBP22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 TRMT13Q9NUP7 481 aaKnown RBP22.33■■□□□ 1.16
VCPKMT-203ENST00000484763 ARVCFO00192 962 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 PES1O00541 588 aaKnown RBP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 SGPL1O95470 568 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 DARSP14868 501 aaKnown RBP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 CRYBB1P53674 252 aaPredicted RBP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 HSP90AA2PQ14568 343 aaPredicted RBP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 VWA3BQ502W6 1294 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 GPD1LQ8N335 351 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 WNT8BQ93098 351 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 SAAL1Q96ER3 474 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 ZBTB45Q96K62 511 aaPredicted RBP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 FBXL18Q96ME1 805 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 PPP1R9BQ96SB3 815 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 CDHR5Q9HBB8 845 aa22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 AGO2Q9UKV8 859 aaKnown RBP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.32■■□□□ 1.16
VCPKMT-203ENST00000484763 A0A0B4J269 797 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 CLDN3O15551 220 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 EIF4BP23588 611 aaKnown RBP22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 PPP2R3AQ06190 1150 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 SNX17Q15036 470 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 SNRNP35Q16560 246 aaKnown RBP22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 BORCS6Q96GS4 357 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 MSTO1Q9BUK6 570 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 CELF4Q9BZC1 486 aaKnown RBP22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 KIAA1586Q9HCI6 787 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 TRPV2Q9Y5S1 764 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 DNAH12Q6ZR08 3092 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 GOLGA8IPA6NC78 632 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 GOLGA8JA6NMD2 632 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 TEX33O43247 280 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 TSPAN1O60635 241 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 PROZP22891 400 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 SFPQP23246 707 aaKnown RBP eCLIP22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 MPZL3Q6UWV2 235 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 INTS8Q75QN2 995 aaKnown RBP22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 RDH13Q8NBN7 331 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 ZSWIM2Q8NEG5 633 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 TCHPQ9BT92 498 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 HAPLN2Q9GZV7 340 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 NDST4Q9H3R1 872 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 TNFSF13BQ9Y275 285 aa22.31■■□□□ 1.16
VCPKMT-203ENST00000484763 EXTL3O43909 919 aa22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 LDHAP00338 332 aaKnown RBP22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 UBXN1Q04323 297 aa22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 MCL1Q07820 350 aa22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 NOLC1Q14978 699 aaKnown RBP eCLIP22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 CBWD2Q8IUF1 395 aa22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 PTPRHQ9HD43 1115 aa22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 CDY2AQ9Y6F7 541 aa22.3■■□□□ 1.16
VCPKMT-203ENST00000484763 ABLIM1O14639 778 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 B4GALT4O60513 344 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 KRT13P13646 458 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 THPOP40225 353 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 BFSP1Q12934 665 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 ZNF568Q3ZCX4 644 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 DCAF17Q5H9S7 520 aaPredicted RBP22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 FKBP15Q5T1M5 1219 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 CATSPER4Q7RTX7 472 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 VSTM4Q8IW00 320 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 TMEM40Q8WWA1 233 aa22.29■■□□□ 1.16
VCPKMT-203ENST00000484763 ADRB2P07550 413 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms