RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 TRIM39Q9HCM9 518 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 NPHS2Q9NP85 383 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 DDX4Q9NQI0 724 aaKnown RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 INCENPQ9NQS7 918 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 KRT84Q9NSB2 600 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 AATFQ9NY61 560 aaKnown RBP eCLIP3.81□□□□□ -1.8
FXN-204ENST00000484259 ETAA1Q9NY74 926 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 IL1RAPL1Q9NZN1 696 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 SPATA7Q9P0W8 599 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 USP36Q9P275 1121 aaKnown RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 MAP10Q9P2G4 905 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 UBA2Q9UBT2 640 aaPredicted RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 STK39Q9UEW8 545 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 PTBP2Q9UKA9 531 aaKnown RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 EDARQ9UNE0 448 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 SSX2IPQ9Y2D8 614 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 SIK3Q9Y2K2 1263 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 PCDHB11Q9Y5F2 797 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 TNPO3Q9Y5L0 923 aaKnown RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 SESN1Q9Y6P5 492 aa3.81□□□□□ -1.8
FXN-204ENST00000484259 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 V9GYY5 206 aaPredicted RBP3.81□□□□□ -1.8
FXN-204ENST00000484259 GAKO14976 1311 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 TTC21BQ7Z4L5 1316 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 CNTNAP5Q8WYK1 1306 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 KRT87PA6NCN2 255 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 LRRC72A6NJI9 287 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 B4E1Z4 1266 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 TISP43B9A030 160 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 B9A039 149 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 M0R2C6 588 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 ENC1O14682 589 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 RNF113AO15541 343 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 MGEA5O60502 916 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 FMO6PO60774 539 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 KERAO60938 352 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 SIN3BO75182 1162 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 ERLIN1O75477 346 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 TUSC2O75896 110 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 PAPLNO95428 1278 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 ATP5BP06576 529 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 THP07101 528 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 SNRNP70P08621 437 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 DLATP10515 647 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 CKMT1AP12532 417 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 CSF2RAP15509 400 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 PORP16435 677 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 CHMP24386 653 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 GUCY2CP25092 1073 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 MCM5P33992 734 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 NF2P35240 595 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 KRT2P35908 639 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 POLD2P49005 469 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 BLVRAP53004 296 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 IRX1P78414 480 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 IFI35P80217 286 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 HTRA3P83110 453 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 HTD2P86397 168 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 YWHAHQ04917 246 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 GABPB1Q06547 395 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 MAPK7Q13164 816 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 TRIM28Q13263 835 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 SMAD4Q13485 552 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 TRPC3Q13507 836 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 STARD3Q14849 445 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 TAF5Q15542 800 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 CCDC40Q4G0X9 1142 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 TDRD12Q587J7 1177 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 C1orf141Q5JVX7 400 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 FBXO47Q5MNV8 452 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 RNF220Q5VTB9 566 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 SHQ1Q6PI26 577 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 VHLLQ6RSH7 139 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 LYPD4Q6UWN0 246 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 AGMOQ6ZNB7 445 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 RGS9BPQ6ZS82 235 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 GK5Q6ZS86 529 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 C15orf52Q6ZUT6 534 aaKnown RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 RAB11FIP2Q7L804 512 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 BNIPLQ7Z465 357 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 KRT73Q86Y46 540 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 MAML2Q8IZL2 1156 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 CACNA2D3Q8IZS8 1091 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 AADATQ8N5Z0 425 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 BEND7Q8N7W2 519 aaPredicted RBP3.8□□□□□ -1.8
FXN-204ENST00000484259 ZBTB34Q8NCN2 500 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 C3orf58Q8NDZ4 430 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 CEP70Q8NHQ1 597 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 MDM1Q8TC05 714 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 GPR152Q8TDT2 470 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 SNX29Q8TEQ0 813 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 GATAD2BQ8WXI9 593 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 BRI3BPQ8WY22 251 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 BSNDQ8WZ55 320 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 SGCDQ92629 289 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 IFT43Q96FT9 208 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 WNK4Q96J92 1243 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 FNBP1Q96RU3 617 aa3.8□□□□□ -1.8
FXN-204ENST00000484259 GAS2L1Q99501 681 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms