RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 SALL3Q9BXA9 1300 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 USP42Q9H9J4 1324 aaKnown RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 DIP2AQ14689 1571 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 A0A087X0B3 334 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 ADCY3O60266 1144 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 NEMFO60524 1076 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 RFPL3O75679 317 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 FAM153BP0C7A2 387 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 MYCLP1P12525 358 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 HSPA4P34932 840 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 ZC3H12BQ5HYM0 836 aaKnown RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 MIIPQ5JXC2 388 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 OTOP3Q7RTS5 596 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 RAVER1Q8IY67 606 aaKnown RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 CNTROBQ8N137 903 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 TSPYL6Q8N831 410 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 EDAQ92838 391 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 PHACTR3Q96KR7 559 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 GTPBP4Q9BZE4 634 aaKnown RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 ALDH8A1Q9H2A2 487 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-211ENST00000484178 CAAP1Q9H8G2 361 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 RBPJLQ9UBG7 517 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 RICTORQ6R327 1708 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 MON2Q7Z3U7 1717 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 OVOS2A0A0J9YW53 1432 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 CRB1P82279 1406 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 OVOS2Q6IE36 1432 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 ADGRL3Q9HAR2 1447 aa5.56□□□□□ -1.52
SSBP1-211ENST00000484178 SBNO1A3KN83 1393 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 FLT4P35916 1363 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 ELP1O95163 1332 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 RAD50Q92878 1312 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 UQCRHLA0A096LP55 91 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 UQCRHP07919 91 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 FAHP16930 419 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 CHMLP26374 656 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 PSMA5P28066 241 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 CSF2RBP32927 897 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 RHBDL3P58872 404 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 PRKD1Q15139 912 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-211ENST00000484178 C21orf62-AS1Q17RA5 79 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 HABP4Q5JVS0 413 aaKnown RBP5.55□□□□□ -1.52
SSBP1-211ENST00000484178 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-211ENST00000484178 TCTN3Q6NUS6 607 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 EEPD1Q7L9B9 569 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 UHMK1Q8TAS1 419 aaKnown RBP5.55□□□□□ -1.52
SSBP1-211ENST00000484178 PIP4K2CQ8TBX8 421 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 GPT2Q8TD30 523 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 CCDC94Q9BW85 323 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-211ENST00000484178 SPATA9Q9BWV2 254 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 MCM8Q9UJA3 840 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 LIMCH1Q9UPQ0 1083 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 PLEKHG2Q9H7P9 1386 aa5.55□□□□□ -1.52
SSBP1-211ENST00000484178 C3P01024 1663 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 CCDC163A0A0D9SF12 145 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 SYCE3A1L190 88 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 KIF2AO00139 706 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 SLC27A2O14975 620 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 FOXS1O43638 330 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 KIF20AO95235 890 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 CKMP06732 381 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 ENO2P09104 434 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 HMOX1P09601 288 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 CCDC192P0DO97 292 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 ZKSCAN1P17029 563 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 SOX5P35711 763 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 EPHA5P54756 1037 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 EPHB1P54762 984 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 KLF10Q13118 480 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 FOXE3Q13461 319 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 EIF4A2Q14240 407 aaKnown RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 NFE2Q16621 373 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 SKIDA1Q1XH10 827 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 PAN2Q504Q3 1202 aaKnown RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 VPS53Q5VIR6 699 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 ATL3Q6DD88 541 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 RNF180Q86T96 592 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 ZBTB38Q8NAP3 1195 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-211ENST00000484178 SSH3Q8TE77 659 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 LMF1Q96S06 567 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 KIF3AQ9Y496 699 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 HS3ST3A1Q9Y663 406 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 OVOS2A0A0G2JMS6 1433 aa5.54□□□□□ -1.52
SSBP1-211ENST00000484178 LMTK3Q96Q04 1460 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 RIMBP3CA6NJZ7 1639 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 RIMBP3BA6NNM3 1639 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 RIMBP3Q9UFD9 1639 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 AKAP12Q02952 1782 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 AGRPO00253 132 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 CTAGE5O15320 804 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 TSPAN6O43657 245 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 PDE8AO60658 829 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms