RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 HPS3Q969F9 1004 aa10.62□□□□□ -0.71
HMG20B-210ENST00000483417 JPH2Q9BR39 696 aaPredicted RBP10.62□□□□□ -0.71
HMG20B-210ENST00000483417 GCOM2Q9BZD3 368 aaPredicted RBP10.62□□□□□ -0.71
HMG20B-210ENST00000483417 POLR3FQ9H1D9 316 aaPredicted RBP10.62□□□□□ -0.71
HMG20B-210ENST00000483417 BLZF1Q9H2G9 400 aa10.62□□□□□ -0.71
HMG20B-210ENST00000483417 MINDY3Q9H8M7 445 aa10.62□□□□□ -0.71
HMG20B-210ENST00000483417 KBTBD4Q9NVX7 518 aa10.62□□□□□ -0.71
HMG20B-210ENST00000483417 PPME1Q9Y570 386 aa10.62□□□□□ -0.71
HMG20B-210ENST00000483417 TTLL13PA6NNM8 815 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 LINC01565O15544 149 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 ZNF623O75123 536 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 FGF18O76093 207 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 SLFN14P0C7P3 912 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 IL9P15248 144 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 IBSPP21815 317 aaPredicted RBP10.61□□□□□ -0.71
HMG20B-210ENST00000483417 TXLNAP40222 546 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 ERVFC1P60507 584 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 PLCB3Q01970 1234 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 UBE3AQ05086 875 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 CUL4BQ13620 913 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 PTCRAQ6ISU1 281 aaPredicted RBP10.61□□□□□ -0.71
HMG20B-210ENST00000483417 ADGRD2Q7Z7M1 963 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 COLGALT1Q8NBJ5 622 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 SLC7A3Q8WY07 619 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 DDX12PQ92771 950 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 MSLNLQ96KJ4 702 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 REEP2Q9BRK0 252 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 KIFC3Q9BVG8 833 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 FGFBP2Q9BYJ0 223 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 CLDND1Q9NY35 253 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 CUL9Q8IWT3 2517 aa10.61□□□□□ -0.71
HMG20B-210ENST00000483417 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 FSCN2O14926 492 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 HOXA2O43364 376 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 TBX10O75333 385 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 EDN1P05305 212 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 GUCY2CP25092 1073 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 HOXA11P31270 313 aaPredicted RBP10.6□□□□□ -0.71
HMG20B-210ENST00000483417 PHKA2P46019 1235 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 PEX3P56589 373 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 CAPSQ13938 189 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 EXOC8Q8IYI6 725 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 RNF149Q8NC42 400 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 GLIS3Q8NEA6 775 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 GPT2Q8TD30 523 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 NLRP4Q96MN2 994 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 FIZ1Q96SL8 496 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 C7orf25Q9BPX7 421 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 INO80BQ9C086 356 aaPredicted RBP10.6□□□□□ -0.71
HMG20B-210ENST00000483417 IKZF4Q9H2S9 585 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 EPHX3Q9H6B9 360 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 AAASQ9NRG9 546 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 DACT1Q9NYF0 836 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 CLEC1BQ9P126 229 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 STK17AQ9UEE5 414 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 COL4A3BPQ9Y5P4 624 aa10.6□□□□□ -0.71
HMG20B-210ENST00000483417 PLXNA4Q9HCM2 1894 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 MEIS3P2A8K0S8 358 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 ASAP2O43150 1006 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 GAS2O43903 313 aaKnown RBP10.59□□□□□ -0.71
HMG20B-210ENST00000483417 KLRC4O43908 158 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 LAG3P18627 525 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 NMT1P30419 496 aaKnown RBP10.59□□□□□ -0.71
HMG20B-210ENST00000483417 MCM4P33991 863 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 PTENP60484 403 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 UBE2HP62256 183 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 POU5F1BQ06416 359 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 KCNC3Q14003 757 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 UBXN11Q5T124 520 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 KCNT2Q6UVM3 1135 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 SRGAP1Q7Z6B7 1085 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 MRPL10Q7Z7H8 261 aaKnown RBP10.59□□□□□ -0.71
HMG20B-210ENST00000483417 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
HMG20B-210ENST00000483417 GJD3Q8N144 294 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 EFHBQ8N7U6 833 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 PSPC1Q8WXF1 523 aaKnown RBP10.59□□□□□ -0.71
HMG20B-210ENST00000483417 CCDC43Q96MW1 224 aaKnown RBP10.59□□□□□ -0.71
HMG20B-210ENST00000483417 TRIM9Q9C026 710 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 ZHX3Q9H4I2 956 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 AGPAT5Q9NUQ2 364 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 FAM105AQ9NUU6 356 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 LZTS1Q9Y250 596 aa10.59□□□□□ -0.71
HMG20B-210ENST00000483417 CCDC169A6NNP5 214 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 PI4K2BG5E9Z4 385 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 SLC16A4O15374 487 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 MBTPS2O43462 519 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 OFD1O75665 1012 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 GLP2RO95838 553 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 IDEP14735 1019 aa10.58□□□□□ -0.72
HMG20B-210ENST00000483417 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMG20B-210ENST00000483417 NPTX2P47972 431 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms