RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 CXXC1Q9P0U4 656 aaPredicted RBP5□□□□□ -1.61
SHANK2-216ENST00000482659 ARHGAP28Q9P2N2 729 aa5□□□□□ -1.61
SHANK2-216ENST00000482659 STK39Q9UEW8 545 aa5□□□□□ -1.61
SHANK2-216ENST00000482659 TNFSF13BQ9Y275 285 aa5□□□□□ -1.61
SHANK2-216ENST00000482659 GIT1Q9Y2X7 761 aa5□□□□□ -1.61
SHANK2-216ENST00000482659 PCDHB2Q9Y5E7 798 aa5□□□□□ -1.61
SHANK2-216ENST00000482659 MGAMO43451 1857 aa5□□□□□ -1.61
SHANK2-216ENST00000482659 CNTNAP2Q9UHC6 1331 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 A0A1B0GVL5 298 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 FRMD3A2A2Y4 597 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 K7ENM7 598 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 KIAA0391O15091 583 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 SLC16A4O15374 487 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 CLDN3O15551 220 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 KINO60870 393 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 CSDE1O75534 798 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 SMC2O95347 1197 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 LDHAP00338 332 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 RB1P06400 928 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 MCF2P10911 925 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ITGA4P13612 1032 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ARF4P18085 180 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 LIG1P18858 919 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 FGFR4P22455 802 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 DNAJB2P25686 324 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 HOXA11P31270 313 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 PPP1R2P41236 205 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 LIG4P49917 911 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 NDUFA8P51970 172 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 YARSP54577 528 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 NCKAP1LP55160 1127 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 SNRPFP62306 86 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ASIC1P78348 528 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 DEFB103AP81534 67 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 HTRA4P83105 476 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 GTF2BQ00403 316 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 RAD51AP2Q09MP3 1159 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 MAPK7Q13164 816 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 BTG3Q14201 252 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 BMS1Q14692 1282 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 AMHR2Q16671 573 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 LONRF3Q496Y0 759 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ZNF697Q5TEC3 545 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 PPP2R2DQ66LE6 453 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 KRBA2Q6ZNG9 492 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 UNC13DQ70J99 1090 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 RTN4RL1Q86UN2 441 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 SYCP3Q8IZU3 236 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 DAW1Q8N136 415 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 CRIPAKQ8N1N5 446 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 TMEM161BQ8NDZ6 487 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 GOLGA5Q8TBA6 731 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 URGCPQ8TCY9 931 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 BICD1Q96G01 975 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 FAM193BQ96PV7 902 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 GSDMAQ96QA5 445 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ACCSQ96QU6 501 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 TSPAN18Q96SJ8 248 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 CCDC94Q9BW85 323 aaPredicted RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 PLVAPQ9BX97 442 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 PBX4Q9BYU1 374 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 OSBPL7Q9BZF2 842 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 TMEM117Q9H0C3 514 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 CCDC113Q9H0I3 377 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ZNF576Q9H609 170 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 MINDY3Q9H8M7 445 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 PLEKHA5Q9HAU0 1116 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 GDPD2Q9HCC8 539 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 CGNQ9P2M7 1197 aaKnown RBP4.99□□□□□ -1.61
SHANK2-216ENST00000482659 SERTAD1Q9UHV2 236 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 TBX20Q9UMR3 447 aa4.99□□□□□ -1.61
SHANK2-216ENST00000482659 ADGRA3Q8IWK6 1321 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 A0A087X0B3 334 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 NPHP3-ACAD11A0A0J9YXS1 232 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 GRXCR1A8MXD5 290 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 HNRNPDLO14979 420 aaKnown RBP4.98□□□□□ -1.61
SHANK2-216ENST00000482659 EIF3DO15371 548 aaKnown RBP eCLIP4.98□□□□□ -1.61
SHANK2-216ENST00000482659 ACTN4O43707 911 aaKnown RBP4.98□□□□□ -1.61
SHANK2-216ENST00000482659 MGEA5O60502 916 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 PRPF40AO75400 957 aaKnown RBP4.98□□□□□ -1.61
SHANK2-216ENST00000482659 GCNT3O95395 438 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 PIGRP01833 764 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 ALDH2P05091 517 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 CA3P07451 260 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 LAG3P18627 525 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 PTMSP20962 102 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 PPM1AP35813 382 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 BMPR1AP36894 532 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 GRM5P41594 1212 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 AFMP43652 599 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 ALDH7A1P49419 539 aaKnown RBP4.98□□□□□ -1.61
SHANK2-216ENST00000482659 RABGGTBP53611 331 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 KRT17Q04695 432 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 RNASELQ05823 741 aaKnown RBP4.98□□□□□ -1.61
SHANK2-216ENST00000482659 MCL1Q07820 350 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 KCNB1Q14721 858 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 PTPROQ16827 1216 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 ZNF568Q3ZCX4 644 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 NOMO2Q5JPE7 1267 aa4.98□□□□□ -1.61
SHANK2-216ENST00000482659 FAM26FQ5R3K3 315 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms