RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 TRAPPC3O43617 180 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 PAEPP09466 180 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 NUDT17P0C025 328 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 YWHABP31946 246 aaKnown RBP16.54■□□□□ 0.24
C9orf3-218ENST00000482056 MAGOHP61326 146 aaKnown RBP16.54■□□□□ 0.24
C9orf3-218ENST00000482056 DRP2Q13474 957 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 USP37Q86T82 979 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 MAGOHBQ96A72 148 aaKnown RBP16.54■□□□□ 0.24
C9orf3-218ENST00000482056 CYFIP2Q96F07 1278 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
C9orf3-218ENST00000482056 ERVK-5Q9HDB9 667 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 MAP3K20Q9NYL2 800 aaKnown RBP16.54■□□□□ 0.24
C9orf3-218ENST00000482056 UBIAD1Q9Y5Z9 338 aa16.54■□□□□ 0.24
C9orf3-218ENST00000482056 CCDC169A6NNP5 214 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 H0YHG0 523 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 DHX15O43143 795 aaKnown RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 FSBPO95073 299 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 CTNNA2P26232 953 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 PLTPP55058 493 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 MTMR1Q13613 665 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 BYSLQ13895 437 aaKnown RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 RASA3Q14644 834 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 MESDQ14696 234 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 RNF187Q5TA31 235 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 FAM71AQ8IYT1 594 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 PRPF38AQ8NAV1 312 aaKnown RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 GLG1Q92896 1179 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 HVCN1Q96D96 273 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 PLVAPQ9BX97 442 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 FAM129AQ9BZQ8 928 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 TMEM117Q9H0C3 514 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 KIAA0391O15091 583 aaKnown RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 SPOPO43791 374 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 COMTP21964 271 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 JAK3P52333 1124 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 SMTNP53814 917 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 NCKAP1LP55160 1127 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 MMS22LQ6ZRQ5 1243 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 FAM83AQ86UY5 434 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 C4orf19Q8IY42 314 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 EPS8L1Q8TE68 723 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 KIFAP3Q92845 792 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 NOCTQ9UK39 431 aaKnown RBP16.53■□□□□ 0.24
C9orf3-218ENST00000482056 SNX24Q9Y343 169 aa16.53■□□□□ 0.24
C9orf3-218ENST00000482056 EP400Q96L91 3159 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 TISP43B9A030 160 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 SLC16A4O15374 487 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 SGPL1O95470 568 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 HSPA1LP34931 641 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 COPB2P35606 906 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 PEX3P56589 373 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 PSMC5P62195 406 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 GHRHRQ02643 423 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 C1orf220Q5T0J3 134 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 MIGA2Q7L4E1 593 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 ZNF564Q8TBZ8 553 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-218ENST00000482056 TLCD1Q96CP7 247 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 STMN4Q9H169 189 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-218ENST00000482056 UVRAGQ9P2Y5 699 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 CAPN7Q9Y6W3 813 aa16.52■□□□□ 0.24
C9orf3-218ENST00000482056 NFIBO00712 420 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CYP1A2P05177 515 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 SFNP31947 248 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 PTGIRP43119 386 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 PDE6CP51160 858 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 SLMAPQ14BN4 828 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 SNRNP35Q16560 246 aaKnown RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 FAM102BQ5T8I3 360 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 KRT39Q6A163 491 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 ZNF746Q6NUN9 644 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 PRELID2Q8N945 189 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 SHC3Q92529 594 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 KRT35Q92764 455 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CENPTQ96BT3 561 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 C18orf8Q96DM3 657 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 COL20A1Q9P218 1284 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CNOT7Q9UIV1 285 aaKnown RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 GTF3C4Q9UKN8 822 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 PNMA2Q9UL42 364 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 ZNF536O15090 1300 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 ALAS1P13196 640 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CHRNB2P17787 502 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 TMOD1P28289 359 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 PEX5P50542 639 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 MCCD1P59942 119 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 MAP2K1Q02750 393 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 ADCY2Q08462 1091 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 IFT88Q13099 833 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 PLCB4Q15147 1175 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CCDC137Q6PK04 289 aaKnown RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 NOP9Q86U38 636 aaKnown RBP16.51■□□□□ 0.23
C9orf3-218ENST00000482056 CNPY4Q8N129 248 aa16.51■□□□□ 0.23
C9orf3-218ENST00000482056 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms