RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PCDHB2Q9Y5E7 798 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 TLL1O43897 1013 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 NR1I2O75469 434 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 DGKIO75912 1065 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 UPP2O95045 317 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 ATF7P17544 494 aaPredicted RBP21.68■■□□□ 1.06
LIME1-205ENST00000480139 LIG1P18858 919 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 CASP1P29466 404 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 NMT1P30419 496 aaKnown RBP21.68■■□□□ 1.06
LIME1-205ENST00000480139 MRPL10Q7Z7H8 261 aaKnown RBP21.68■■□□□ 1.06
LIME1-205ENST00000480139 MAP4K3Q8IVH8 894 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 SP7Q8TDD2 431 aaPredicted RBP21.68■■□□□ 1.06
LIME1-205ENST00000480139 ZNF689Q96CS4 500 aaPredicted RBP21.68■■□□□ 1.06
LIME1-205ENST00000480139 ACO2Q99798 780 aaKnown RBP21.68■■□□□ 1.06
LIME1-205ENST00000480139 MSRAQ9UJ68 235 aa21.68■■□□□ 1.06
LIME1-205ENST00000480139 FNDC1Q4ZHG4 1894 aaPredicted RBP21.67■■□□□ 1.06
LIME1-205ENST00000480139 HOXA2O43364 376 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 KLRC4O43908 158 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 PIGRP01833 764 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 PROZP22891 400 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 DPYDQ12882 1025 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 APBB1IPQ7Z5R6 666 aaPredicted RBP21.67■■□□□ 1.06
LIME1-205ENST00000480139 PGBD4Q96DM1 585 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 ADPGKQ9BRR6 497 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 EIF2AQ9BY44 585 aaKnown RBP21.67■■□□□ 1.06
LIME1-205ENST00000480139 PTPRHQ9HD43 1115 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 PCDHB13Q9Y5F0 798 aa21.67■■□□□ 1.06
LIME1-205ENST00000480139 KINO60870 393 aaKnown RBP21.66■■□□□ 1.06
LIME1-205ENST00000480139 TOM1L1O75674 476 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 GCNT3O95395 438 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 DNAJB2P25686 324 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 RABGGTBP53611 331 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 POSTNQ15063 836 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 TMEM132AQ24JP5 1023 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 DCAF4L1Q3SXM0 396 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 ZC2HC1CQ53FD0 456 aaPredicted RBP21.66■■□□□ 1.06
LIME1-205ENST00000480139 FAM26FQ5R3K3 315 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 GPR153Q6NV75 609 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 FAM117BQ6P1L5 589 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 STXBP4Q6ZWJ1 553 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 YME1L1Q96TA2 773 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 TARS2Q9BW92 718 aaKnown RBP21.66■■□□□ 1.06
LIME1-205ENST00000480139 TRIM6Q9C030 488 aaPredicted RBP21.66■■□□□ 1.06
LIME1-205ENST00000480139 TBC1D7Q9P0N9 293 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 HOOK1Q9UJC3 728 aaKnown RBP21.66■■□□□ 1.06
LIME1-205ENST00000480139 IPPQ9Y573 584 aa21.66■■□□□ 1.06
LIME1-205ENST00000480139 ZMYM2Q9UBW7 1377 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 TMEM265A0A087WTH1 108 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.65■■□□□ 1.06
LIME1-205ENST00000480139 GOLGA6L22H0YM25 854 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 SOX1O00570 391 aaPredicted RBP21.65■■□□□ 1.06
LIME1-205ENST00000480139 PRR29P0C7W0 189 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 PBX2P40425 430 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 L1TD1Q5T7N2 865 aaKnown RBP21.65■■□□□ 1.06
LIME1-205ENST00000480139 MPZL3Q6UWV2 235 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 CMTR2Q8IYT2 770 aaKnown RBP21.65■■□□□ 1.06
LIME1-205ENST00000480139 HACE1Q8IYU2 909 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 SMG8Q8ND04 991 aaKnown RBP21.65■■□□□ 1.06
LIME1-205ENST00000480139 UBN1Q9NPG3 1134 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 LMBRD1Q9NUN5 540 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 USP20Q9Y2K6 914 aa21.65■■□□□ 1.06
LIME1-205ENST00000480139 YBX2Q9Y2T7 364 aaKnown RBP21.65■■□□□ 1.06
LIME1-205ENST00000480139 LAMA2P24043 3122 aaKnown RBP21.64■■□□□ 1.05
LIME1-205ENST00000480139 ABLIM1O14639 778 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 HNRNPDLO14979 420 aaKnown RBP21.64■■□□□ 1.05
LIME1-205ENST00000480139 EIF3DO15371 548 aaKnown RBP eCLIP21.64■■□□□ 1.05
LIME1-205ENST00000480139 NPTXRO95502 500 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 RPN1P04843 607 aaKnown RBP21.64■■□□□ 1.05
LIME1-205ENST00000480139 CASP5P51878 434 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 PSMD2Q13200 908 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 EEF1DP3Q658K8 133 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 EPM2AIP1Q7L775 607 aaPredicted RBP21.64■■□□□ 1.05
LIME1-205ENST00000480139 CDR2LQ86X02 465 aaPredicted RBP21.64■■□□□ 1.05
LIME1-205ENST00000480139 CCDC47Q96A33 483 aaKnown RBP21.64■■□□□ 1.05
LIME1-205ENST00000480139 RNF19AQ9NV58 838 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 EXOC1Q9NV70 894 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 EXOC7Q9UPT5 735 aa21.64■■□□□ 1.05
LIME1-205ENST00000480139 UBE4BO95155 1302 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 RALGAPA2Q2PPJ7 1873 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 RHOBTB3O94955 611 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 MYBP10242 640 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 MCF2P10911 925 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 LIG4P49917 911 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 KCNB1Q14721 858 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 ZNF568Q3ZCX4 644 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 KMT5BQ4FZB7 885 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 HPS3Q969F9 1004 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 TIFAQ96CG3 184 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 BICD1Q96G01 975 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 ACCSQ96QU6 501 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 FGFBP2Q9BYJ0 223 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 TMEM117Q9H0C3 514 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 CDT1Q9H211 546 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 TMEM206Q9H813 350 aa21.63■■□□□ 1.05
LIME1-205ENST00000480139 INPPL1O15357 1258 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 CA3P07451 260 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 FGFR1P11362 822 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 ITGA4P13612 1032 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 MYOGP15173 224 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 IBSPP21815 317 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms