RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 ETNK1Q9HBU6 452 aa11.62□□□□□ -0.55
EWSR1-216ENST00000479135 RCOR1Q9UKL0 485 aa11.62□□□□□ -0.55
EWSR1-216ENST00000479135 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
EWSR1-216ENST00000479135 RASA4BC9J798 803 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 RASA4O43374 803 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 HAUS5O94927 633 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 SERPINH1P50454 418 aaKnown RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 MYL7Q01449 175 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 CASP8Q14790 479 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 PDZK1Q5T2W1 519 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TIGD7Q6NT04 549 aaPredicted RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 CACTIN-AS1Q8N1I8 211 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 LSM14AQ8ND56 463 aaKnown RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 KATNAL1Q9BW62 490 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 HEMGNQ9BXL5 484 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 DOLKQ9UPQ8 538 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TPST1O60507 370 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 NCAM1P13591 858 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 SNRNP48Q6IEG0 339 aaKnown RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 LRRC70Q7Z2Q7 622 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 SRRM1Q8IYB3 904 aaKnown RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 CNDP1Q96KN2 507 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 ENTPD7Q9NQZ7 604 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 L1RE1Q9UN81 338 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 UHRF1BP1Q6BDS2 1440 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 GNPATO15228 680 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 ZNF500O60304 480 aaPredicted RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 RNASE12Q5GAN4 147 aaKnown RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TEX2Q8IWB9 1127 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 CITED4Q96RK1 184 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 MNTQ99583 582 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TPCN1Q9ULQ1 816 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 PPM1BO75688 479 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 IGHDP01880 384 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TERF2Q15554 542 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 GADL1Q6ZQY3 521 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 ATP8B4Q8TF62 1192 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 PIGKQ92643 395 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 FAM192AQ9GZU8 254 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 ECE2O60344 883 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 CYP7B1O75881 506 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
EWSR1-216ENST00000479135 DGKHQ86XP1 1220 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TEX13BQ9BXU2 312 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 STOML1Q9UBI4 398 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 MYO1FO00160 1098 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TRIM24O15164 1050 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 SFNP31947 248 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 CREB3L3Q68CJ9 461 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 ANKRD40Q6AI12 368 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 IQSEC1Q6DN90 963 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TXNDC11Q6PKC3 985 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 RNF139Q8WU17 664 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 GJA10Q969M2 543 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 PACSIN1Q9BY11 444 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 NFU1Q9UMS0 254 aa11.61□□□□□ -0.55
EWSR1-216ENST00000479135 TIMM44O43615 452 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 CYP4A11Q02928 519 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 CYP4A22Q5TCH4 519 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 RASSF6Q6ZTQ3 369 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 FASTKD5Q7L8L6 764 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 EPHX4Q8IUS5 362 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 TOR3AQ9H497 397 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 DDX56Q9NY93 547 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 NESP48681 1621 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 CLIC2O15247 247 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 ZBED1O96006 694 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 ZCCHC18P0CG32 403 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 PGM1P36871 562 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 TSNQ15631 228 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 TRIQKQ629K1 86 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 R3HCC1LQ7Z5L2 792 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 P3H2Q8IVL5 708 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 DLGAP2Q9P1A6 1054 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 C2orf71A6NGG8 1288 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 TEDDM1Q5T9Z0 273 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 DDX53Q86TM3 631 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 FBXO11Q86XK2 927 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 PGBD3Q8N328 593 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 DHX38Q92620 1227 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 COPS7BQ9H9Q2 264 aaPredicted RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 APPL1Q9UKG1 709 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 RUNDC3AQ59EK9 446 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 HEXIM2Q96MH2 286 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 GCNAQ96QF7 691 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 TGS1Q96RS0 853 aaKnown RBP11.6□□□□□ -0.55
EWSR1-216ENST00000479135 GMEB1Q9Y692 573 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 A0A0B4J269 797 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 AIM2O14862 343 aa11.6□□□□□ -0.55
EWSR1-216ENST00000479135 PFKFB2O60825 505 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms