RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 WHRNQ9P202 907 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 SERPINB13Q9UIV8 391 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 VPS28Q9UK41 221 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 AKT3Q9Y243 479 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PCDHA11Q9Y5I1 949 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 SNX13Q9Y5W8 968 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 RSF1Q96T23 1441 aaPredicted RBP6.59□□□□□ -1.36
RC3H1-204ENST00000479099 POM121BA6NF01 834 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ACKR2O00590 384 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 DAPK3O43293 454 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF862O60290 1169 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 DTNBO60941 627 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 SCG5P05408 212 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ADRB2P07550 413 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF865P0CJ78 1059 aaPredicted RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 P4HA1P13674 534 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 CD86P42081 329 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 KCNJ6P48051 423 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ITGA8P53708 1063 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 CUL4AQ13619 759 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 BECN1Q14457 450 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 INPP5AQ14642 412 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 KIF4BQ2VIQ3 1234 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 UBXN11Q5T124 520 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 RPUSD3Q6P087 351 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 USP53Q70EK8 1073 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 HDXQ7Z353 690 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 MTDHQ86UE4 582 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ZC3H7AQ8IWR0 971 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ATG16L2Q8NAA4 619 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 OR10H5Q8NGA6 315 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 TDRD7Q8NHU6 1098 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 RSAD2Q8WXG1 361 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 RRP36Q96EU6 259 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 CEP95Q96GE4 821 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 TSGA13Q96PP4 275 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 FANCD2OSQ96PS1 177 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 GPATCH1Q9BRR8 931 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ZC3H12CQ9C0D7 883 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 C2orf40Q9H1Z8 148 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 NOL6Q9H6R4 1146 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 SPON1Q9HCB6 807 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 PREBQ9HCU5 417 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 PAK6Q9NQU5 681 aaPredicted RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 PIH1D1Q9NWS0 290 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ZSWIM5Q9P217 1185 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 LRFN1Q9P244 771 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ITGB1BP2Q9UKP3 347 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 NOC2LQ9Y3T9 749 aaKnown RBP6.58□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF711Q9Y462 761 aa6.58□□□□□ -1.36
RC3H1-204ENST00000479099 PI4KAP2A4QPH2 592 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 SYT5O00445 386 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 PLA2G6O60733 806 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 MT-ND3P03897 115 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 GSNP06396 782 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 IL11P20809 199 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 HOXD13P35453 343 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 ACTN2P35609 894 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 MTNR1BP49286 362 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 KIF23Q02241 960 aaPredicted RBP6.57□□□□□ -1.36
RC3H1-204ENST00000479099 IFT88Q13099 833 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 ERV3-1Q14264 604 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 SLMAPQ14BN4 828 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 ASIC2Q16515 512 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 METTL24Q5JXM2 366 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 DCAF15Q66K64 600 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 HAUS3Q68CZ6 603 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 GTF2IRD2BQ6EKJ0 949 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 GALNT17Q6IS24 598 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 CNSTQ6PJW8 725 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 KCNT2Q6UVM3 1135 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 USP51Q70EK9 711 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 GTF2IRD2Q86UP8 949 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 CPOQ8IVL8 374 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 ARHGEF39Q8N4T4 335 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 RNF152Q8N8N0 203 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 ZFYVE21Q9BQ24 234 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 PYM1Q9BRP8 204 aaKnown RBP6.57□□□□□ -1.36
RC3H1-204ENST00000479099 CNPPD1Q9BV87 410 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 KRTAP9-9Q9BYP9 154 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 VPS33BQ9H267 617 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 NKX2-4Q9H2Z4 354 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 GRPEL1Q9HAV7 217 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 XAB2Q9HCS7 855 aaKnown RBP6.57□□□□□ -1.36
RC3H1-204ENST00000479099 HAUS2Q9NVX0 235 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 DNAJC28Q9NX36 388 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 TUBD1Q9UJT1 453 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 AGTPBP1Q9UPW5 1226 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 SMC3Q9UQE7 1217 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 SLC5A6Q9Y289 635 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 PCDHGC5Q9Y5F6 944 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 GPR45Q9Y5Y3 372 aa6.57□□□□□ -1.36
RC3H1-204ENST00000479099 TMEM110-MUSTN1A8MSY1 372 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 IPO5O00410 1097 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms