RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CEP104O60308 925 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 GALCP54803 685 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 PEX26Q7Z412 305 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 METTL13Q8N6R0 699 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 RUFY1Q96T51 708 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 APEX2Q9UBZ4 518 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 NCANO14594 1321 aa29.79■■■□□ 2.36
CHKB-208ENST00000479003 TRIM49P0CI25 452 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 TRIM49CP0CI26 452 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 COPB2P35606 906 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 BFSP1Q12934 665 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.78■■■□□ 2.36
CHKB-208ENST00000479003 KLHL7Q8IXQ5 586 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 EIF1ADQ8N9N8 165 aaKnown RBP29.78■■■□□ 2.36
CHKB-208ENST00000479003 WHAMMQ8TF30 809 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 ZIM3Q96PE6 472 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 EFCC1Q9HA90 598 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 PGRMC1O00264 195 aaKnown RBP29.78■■■□□ 2.36
CHKB-208ENST00000479003 MYL7Q01449 175 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 STXBP2Q15833 593 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 PADI6Q6TGC4 694 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 SYCP3Q8IZU3 236 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 IQCKQ8N0W5 287 aa29.78■■■□□ 2.36
CHKB-208ENST00000479003 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.78■■■□□ 2.361e-6■■■■□ 23.5
CHKB-208ENST00000479003 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.78■■■□□ 2.366e-7■■□□□ 13.4
CHKB-208ENST00000479003 EXOC3O60645 756 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 STAM2O75886 525 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 CCNE2O96020 404 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 CCDC172P0C7W6 258 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 MAPTP10636 758 aaKnown RBP29.77■■■□□ 2.36
CHKB-208ENST00000479003 KCNA2P16389 499 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 NT5DC3Q86UY8 548 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 RASAL3Q86YV0 1011 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 RASGEF1CQ8N431 466 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 GTF3C2Q8WUA4 911 aaPredicted RBP29.77■■■□□ 2.36
CHKB-208ENST00000479003 PLEKHA4Q9H4M7 779 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 SAMM50Q9Y512 469 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 MAFGO15525 162 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 TMEM253P0C7T8 217 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 ZNF157P51786 506 aaPredicted RBP29.77■■■□□ 2.36
CHKB-208ENST00000479003 SAPCD2Q86UD0 394 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 GLYCTKQ8IVS8 523 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 GPRC5AQ8NFJ5 357 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 MMP19Q99542 508 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 MROH8Q9H579 483 aa29.77■■■□□ 2.36
CHKB-208ENST00000479003 DOCK5Q9H7D0 1870 aa29.76■■■□□ 2.36
CHKB-208ENST00000479003 P4HBP07237 508 aaKnown RBP29.76■■■□□ 2.35
CHKB-208ENST00000479003 KCTD2Q14681 263 aa29.76■■■□□ 2.35
CHKB-208ENST00000479003 TMEM174Q8WUU8 243 aa29.76■■■□□ 2.35
CHKB-208ENST00000479003 FGD4Q96M96 766 aa29.76■■■□□ 2.35
CHKB-208ENST00000479003 CCDC43Q96MW1 224 aaKnown RBP29.76■■■□□ 2.35
CHKB-208ENST00000479003 ISCUQ9H1K1 167 aa29.76■■■□□ 2.35
CHKB-208ENST00000479003 NOC2LQ9Y3T9 749 aaKnown RBP29.76■■■□□ 2.35
CHKB-208ENST00000479003 PASKQ96RG2 1323 aa29.76■■■□□ 2.35
CHKB-208ENST00000479003 TMCO5BA8MYB1 307 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 BHMG1C9JSJ3 638 aaPredicted RBP29.75■■■□□ 2.35
CHKB-208ENST00000479003 RFX1P22670 979 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 EDNRBP24530 442 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 ALCAMQ13740 583 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 GNPTABQ3T906 1256 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 FOXR1Q6PIV2 292 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 DAAM2Q86T65 1068 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 HES6Q96HZ4 224 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 CCDC188H7C350 402 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 K7ENM7 598 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 TTMPQ5BVD1 217 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 CFAP58Q5T655 872 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 ARL8AQ96BM9 186 aa29.75■■■□□ 2.35
CHKB-208ENST00000479003 LARSQ9P2J5 1176 aaKnown RBP29.75■■■□□ 2.35
CHKB-208ENST00000479003 DBR1Q9UK59 544 aaKnown RBP29.75■■■□□ 2.35
CHKB-208ENST00000479003 LRRC37A2A6NM11 1700 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 DNAJC25-GNG10A0A024R161 153 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 SHCBP1Q8NEM2 672 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 LMO3Q8TAP4 145 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 RFFLQ8WZ73 363 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 TMEM206Q9H813 350 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 SPATA31C2B4DYI2 1134 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 TRADDQ15628 312 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 PTPROQ16827 1216 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 CD302Q8IX05 232 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 CDHR1Q96JP9 859 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 TELO2Q9Y4R8 837 aa29.74■■■□□ 2.35
CHKB-208ENST00000479003 PPFIA4O75335 1185 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 KRT13P13646 458 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 KRT76Q01546 638 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 SP2Q02086 613 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 KIF22Q14807 665 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 PIK3R5Q8WYR1 880 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 AMFRQ9UKV5 643 aa29.73■■■□□ 2.35
CHKB-208ENST00000479003 GUCY2FP51841 1108 aa29.72■■■□□ 2.35
CHKB-208ENST00000479003 IRX5P78411 483 aaPredicted RBP29.72■■■□□ 2.35
CHKB-208ENST00000479003 PHLDB3Q6NSJ2 640 aa29.72■■■□□ 2.35
CHKB-208ENST00000479003 SEPT14Q6ZU15 432 aa29.72■■■□□ 2.35
CHKB-208ENST00000479003 INTS8Q75QN2 995 aaKnown RBP29.72■■■□□ 2.35
CHKB-208ENST00000479003 C12orf56Q8IXR9 622 aa29.72■■■□□ 2.35
CHKB-208ENST00000479003 SLC35G2Q8TBE7 412 aa29.72■■■□□ 2.35
CHKB-208ENST00000479003 GPBP1L1Q9HC44 474 aaPredicted RBP29.72■■■□□ 2.35
CHKB-208ENST00000479003 ZNFX1Q9P2E3 1918 aaKnown RBP29.72■■■□□ 2.35
CHKB-208ENST00000479003 SORBS3O60504 671 aa29.72■■■□□ 2.35
CHKB-208ENST00000479003 CUL1Q13616 776 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms