RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 GFRA3O60609 400 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 SOD2P04179 222 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 CNPP09543 421 aaKnown RBP14.75□□□□□ -0.05
VCL-205ENST00000478896 AXLP30530 894 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 MLH1P40692 756 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 NUBP1P53384 320 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 NR5A1Q13285 461 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 ANKRD1Q15327 319 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 PCBP1Q15365 356 aaKnown RBP eCLIP14.75□□□□□ -0.05
VCL-205ENST00000478896 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
VCL-205ENST00000478896 ELMSAN1Q6PJG2 1045 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 GPR149Q86SP6 731 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 HACE1Q8IYU2 909 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 SMG8Q8ND04 991 aaKnown RBP14.75□□□□□ -0.05
VCL-205ENST00000478896 CPB2Q96IY4 423 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 HERC2P3Q9BVR0 1158 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 EIF2AQ9BY44 585 aaKnown RBP14.75□□□□□ -0.05
VCL-205ENST00000478896 MAN1C1Q9NR34 630 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 SSX2IPQ9Y2D8 614 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 WDFY4Q6ZS81 3184 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 PLXNA3P51805 1871 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 ZDBF2Q9HCK1 2354 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 ZBTB39O15060 712 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 TSPAN1O60635 241 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 NR1I2O75469 434 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 ADH1AP07327 375 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 SPIRE1Q08AE8 756 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 CALCRLQ16602 461 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 OTOP3Q7RTS5 596 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 COLGALT2Q8IYK4 626 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 CCDC51Q96ER9 411 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 GAD1Q99259 594 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 EIF2AK1Q9BQI3 630 aaKnown RBP14.74□□□□□ -0.05
VCL-205ENST00000478896 XPNPEP1Q9NQW7 623 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 MARCH5Q9NX47 278 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 PCDHA12Q9UN75 941 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 HES2Q9Y543 173 aa14.74□□□□□ -0.05
VCL-205ENST00000478896 PIEZO1Q92508 2521 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 ARL5CA6NH57 179 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
VCL-205ENST00000478896 ST18O60284 1047 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 DGAT1O75907 488 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 SLITRK3O94933 977 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 CTDNEP1O95476 244 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 GLUD1P00367 558 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 GLUD2P49448 558 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 SCNN1GP51170 649 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 FOSBP53539 338 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 PTENP60484 403 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 C15orf39Q6ZRI6 1047 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 TMEM105Q8N8V8 129 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 FLCNQ8NFG4 579 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 CSRNP2Q9H175 543 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 DPP7Q9UHL4 492 aa14.73□□□□□ -0.05
VCL-205ENST00000478896 NEMFO60524 1076 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 MYBP10242 640 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 MBTD1Q05BQ5 628 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 CAPSQ13938 189 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 TRIM29Q14134 588 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 ASTLQ6HA08 431 aaPredicted RBP14.72□□□□□ -0.05
VCL-205ENST00000478896 ASAP3Q8TDY4 903 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 ZFP42Q96MM3 310 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 RPS6KC1Q96S38 1066 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 POLR3FQ9H1D9 316 aaPredicted RBP14.72□□□□□ -0.05
VCL-205ENST00000478896 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 NXF3Q9H4D5 531 aaKnown RBP14.72□□□□□ -0.05
VCL-205ENST00000478896 TTC12Q9H892 705 aaPredicted RBP14.72□□□□□ -0.05
VCL-205ENST00000478896 FBXL21Q9UKT6 434 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 GIT1Q9Y2X7 761 aa14.72□□□□□ -0.05
VCL-205ENST00000478896 CCDC195A0A1B0GUA6 201 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 INPPL1O15357 1258 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 TEX28O15482 410 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 USO1O60763 962 aaKnown RBP14.71□□□□□ -0.05
VCL-205ENST00000478896 LILRB3O75022 631 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 ARF4P18085 180 aaPredicted RBP14.71□□□□□ -0.05
VCL-205ENST00000478896 GBP2P32456 591 aaPredicted RBP14.71□□□□□ -0.05
VCL-205ENST00000478896 TXKP42681 527 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 DSC1Q08554 894 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 TDGQ13569 410 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 IFNLR1Q8IU57 520 aaPredicted RBP14.71□□□□□ -0.05
VCL-205ENST00000478896 GLYCTKQ8IVS8 523 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 NECAB1Q8N987 351 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 STAMQ92783 540 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 COLEC11Q9BWP8 271 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 ANKEF1Q9NU02 776 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 PARP2Q9UGN5 583 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 DUSP12Q9UNI6 340 aa14.71□□□□□ -0.05
VCL-205ENST00000478896 POTEMA6NI47 508 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 LRRIQ4A6NIV6 560 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 LYPLA2O95372 231 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 NPTXRO95502 500 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 NEFLP07196 543 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
VCL-205ENST00000478896 GLRA2P23416 452 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 AKAP5P24588 427 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 RARRES1P49788 294 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 ANAPC15P60006 121 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 DSG1Q02413 1049 aa14.7□□□□□ -0.06
VCL-205ENST00000478896 POU5F1BQ06416 359 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms