RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ST6GALNAC4Q9H4F1 302 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 TMEM161AQ9NX61 479 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 MTUS1Q9ULD2 1270 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 MYH11P35749 1972 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 ZNF623O75123 536 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 ABCD1P33897 745 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 RAB27AP51159 221 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 PRPF4BQ13523 1007 aaKnown RBP29.46■■■□□ 2.31
CCM2-211ENST00000478582 UBXN11Q5T124 520 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 KRBA2Q6ZNG9 492 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 ECHDC2Q86YB7 292 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 FAM178BQ8IXR5 827 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 CCDC65Q8IXS2 484 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 CPB2Q96IY4 423 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 PANK4Q9NVE7 773 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 PCDHB7Q9Y5E2 793 aa29.46■■■□□ 2.31
CCM2-211ENST00000478582 COL4A6Q14031 1691 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 EOMESO95936 686 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 EDN1P05305 212 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 MYL1P05976 194 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 IDEP14735 1019 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 AFMP43652 599 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 FAM160A1Q05DH4 1040 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 SNW1Q13573 536 aaKnown RBP29.45■■■□□ 2.31
CCM2-211ENST00000478582 ZNF598Q86UK7 904 aaKnown RBP29.45■■■□□ 2.31
CCM2-211ENST00000478582 SFR1Q86XK3 245 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 C17orf80Q9BSJ5 609 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 OLFML3Q9NRN5 406 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 FAM105AQ9NUU6 356 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 LMCD1Q9NZU5 365 aa29.45■■■□□ 2.31
CCM2-211ENST00000478582 TTLL13PA6NNM8 815 aa29.44■■■□□ 2.3
CCM2-211ENST00000478582 GADD45BO75293 160 aaPredicted RBP29.44■■■□□ 2.3
CCM2-211ENST00000478582 HERC4Q5GLZ8 1057 aaPredicted RBP29.44■■■□□ 2.3
CCM2-211ENST00000478582 NT5DC1Q5TFE4 455 aa29.44■■■□□ 2.3
CCM2-211ENST00000478582 ZNF720Q7Z2F6 126 aa29.44■■■□□ 2.3
CCM2-211ENST00000478582 CNNM3Q8NE01 707 aa29.44■■■□□ 2.3
CCM2-211ENST00000478582 LRFN2Q9ULH4 789 aa29.44■■■□□ 2.3
CCM2-211ENST00000478582 PRRC2BQ5JSZ5 2229 aaKnown RBP29.44■■■□□ 2.3
CCM2-211ENST00000478582 PVALEFA0A1B0GWK0 134 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 DGKIO75912 1065 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 LIG1P18858 919 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 ASIC1P78348 528 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 GTF2BQ00403 316 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 CUL4BQ13620 913 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 SLC27A1Q6PCB7 646 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 MRPL10Q7Z7H8 261 aaKnown RBP29.43■■■□□ 2.3
CCM2-211ENST00000478582 MICALL1Q8N3F8 863 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 FIBCD1Q8N539 461 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 FBXO22Q8NEZ5 403 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 GDPD5Q8WTR4 605 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 ZNF689Q96CS4 500 aaPredicted RBP29.43■■■□□ 2.3
CCM2-211ENST00000478582 RC3H2Q9HBD1 1191 aaKnown RBP29.43■■■□□ 2.3
CCM2-211ENST00000478582 PRUNE2Q8WUY3 3088 aa29.43■■■□□ 2.3
CCM2-211ENST00000478582 K7ENM7 598 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 N4BP3O15049 544 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 ATF7P17544 494 aaPredicted RBP29.42■■■□□ 2.3
CCM2-211ENST00000478582 NMT1P30419 496 aaKnown RBP29.42■■■□□ 2.3
CCM2-211ENST00000478582 STRN3Q13033 797 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 KANK3Q6NY19 840 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 UNC13DQ70J99 1090 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 GRAMD1CQ8IYS0 662 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 ACO2Q99798 780 aaKnown RBP29.42■■■□□ 2.3
CCM2-211ENST00000478582 STRA6Q9BX79 667 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 MRPL4Q9BYD3 311 aaKnown RBP29.42■■■□□ 2.3
CCM2-211ENST00000478582 BLZF1Q9H2G9 400 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 PDZD7Q9H5P4 517 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 PRDM6Q9NQX0 595 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 TNFSF13BQ9Y275 285 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 PCDHB2Q9Y5E7 798 aa29.42■■■□□ 2.3
CCM2-211ENST00000478582 COL4A4P53420 1690 aaPredicted RBP29.41■■■□□ 2.3
CCM2-211ENST00000478582 TRANK1O15050 2925 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 CASP1P29466 404 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 UBE2HP62256 183 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 COASYQ13057 564 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 EPC2Q52LR7 807 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 ATF7IP2Q5U623 682 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 TMEM192Q8IY95 271 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 HVCN1Q96D96 273 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 CCDC34Q96HJ3 373 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 TIGD1Q96MW7 591 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 EIF2AQ9BY44 585 aaKnown RBP29.41■■■□□ 2.3
CCM2-211ENST00000478582 TBX20Q9UMR3 447 aa29.41■■■□□ 2.3
CCM2-211ENST00000478582 PPP1R37O75864 691 aa29.4■■■□□ 2.3
CCM2-211ENST00000478582 EHHADHQ08426 723 aa29.4■■■□□ 2.3
CCM2-211ENST00000478582 PGBD4Q96DM1 585 aa29.4■■■□□ 2.3
CCM2-211ENST00000478582 MRPL44Q9H9J2 332 aaKnown RBP29.4■■■□□ 2.3
CCM2-211ENST00000478582 PTPRHQ9HD43 1115 aa29.4■■■□□ 2.3
CCM2-211ENST00000478582 USP20Q9Y2K6 914 aa29.4■■■□□ 2.3
CCM2-211ENST00000478582 HOXA2O43364 376 aa29.39■■■□□ 2.3
CCM2-211ENST00000478582 PRPF40AO75400 957 aaKnown RBP29.39■■■□□ 2.3
CCM2-211ENST00000478582 ALCAMQ13740 583 aa29.39■■■□□ 2.3
CCM2-211ENST00000478582 ZPBP2Q6X784 338 aa29.39■■■□□ 2.3
CCM2-211ENST00000478582 CDR2LQ86X02 465 aaPredicted RBP29.39■■■□□ 2.3
CCM2-211ENST00000478582 SMG8Q8ND04 991 aaKnown RBP29.39■■■□□ 2.3
CCM2-211ENST00000478582 GBP4Q96PP9 640 aa29.39■■■□□ 2.3
CCM2-211ENST00000478582 TARS2Q9BW92 718 aaKnown RBP29.39■■■□□ 2.3
CCM2-211ENST00000478582 RNF19AQ9NV58 838 aa29.39■■■□□ 2.3
CCM2-211ENST00000478582 UNC80Q8N2C7 3258 aa29.39■■■□□ 2.29
CCM2-211ENST00000478582 NLRC5Q86WI3 1866 aa29.38■■■□□ 2.29
CCM2-211ENST00000478582 DLL1O00548 723 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms