RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	BRPF3	Q9ULD4	1205 aa		11.89	□□□□□ -0.51
APTX-222	ENST00000478279	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-222	ENST00000478279	GOLGA8A	A7E2F4	631 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	GOLGA8B	A8MQT2	603 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	TGM5	O43548	720 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	GAS7	O60861	476 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	STBD1	O95210	358 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	GNA11	P29992	359 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	CDC27	P30260	824 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	GPC5	P78333	572 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	PRKCQ	Q04759	706 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	CSTF1	Q05048	431 aa	Known RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	SNW1	Q13573	536 aa	Known RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	NECTIN1	Q15223	517 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	LILRA6	Q6PI73	481 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	COLGALT2	Q8IYK4	626 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	ZBTB44	Q8NCP5	570 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	RDM1	Q8NG50	284 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	SLC5A5	Q92911	643 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	SECISBP2L	Q93073	1101 aa	Known RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	NLRP4	Q96MN2	994 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	JPH2	Q9BR39	696 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	SH2D3A	Q9BRG2	576 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	RTKN	Q9BST9	563 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	RPP25	Q9BUL9	199 aa	Known RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	TEKT3	Q9BXF9	490 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	OSBPL6	Q9BZF3	934 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	IFT122	Q9HBG6	1241 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	UBN1	Q9NPG3	1134 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	CHST7	Q9NS84	486 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	CDV3	Q9UKY7	258 aa	Known RBP	11.88	□□□□□ -0.51
APTX-222	ENST00000478279	MYH15	Q9Y2K3	1946 aa		11.88	□□□□□ -0.51
APTX-222	ENST00000478279	CNOT1	A5YKK6	2376 aa	Known RBP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	TMEM150B	A6NC51	233 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	EDIL3	O43854	480 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	NCL	P19338	710 aa	Known RBP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	FSHR	P23945	695 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	HOXA11	P31270	313 aa	Predicted RBP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	MAGEA9	P43362	315 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	EXOSC10	Q01780	885 aa	Known RBP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	MLF2	Q15773	248 aa	Predicted RBP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	ST3GAL2	Q16842	350 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	SLC44A4	Q53GD3	710 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	UBXN11	Q5T124	520 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	LRCH2	Q5VUJ6	765 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	PARM1	Q6UWI2	310 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	MIER3	Q7Z3K6	550 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	GPR65	Q8IYL9	337 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	CNNM3	Q8NE01	707 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	FGF14	Q92915	247 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	CCDC136	Q96JN2	1154 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	EPC1	Q9H2F5	836 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	ZSCAN32	Q9NX65	697 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	SMG5	Q9UPR3	1016 aa	Known RBP	11.87	□□□□□ -0.51
APTX-222	ENST00000478279	PATJ	Q8NI35	1801 aa		11.87	□□□□□ -0.51
APTX-222	ENST00000478279	DCDC2B	A2VCK2	349 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	FAM170B	A6NMN3	283 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	DDX11L8	A8MPP1	907 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	TBC1D4	O60343	1298 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	NR1I2	O75469	434 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	ZMYND10	O75800	440 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	PSMD10	O75832	226 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	ADRB1	P08588	477 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	ITGA4	P13612	1032 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	TGM1	P22735	817 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	ADD1	P35611	737 aa	Known RBP	11.86	□□□□□ -0.51
APTX-222	ENST00000478279	USP11	P51784	963 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	RCAN1	P53805	252 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	DSC1	Q08554	894 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	UBXN2B	Q14CS0	331 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	USP41	Q3LFD5	358 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-222	ENST00000478279	SRGAP1	Q7Z6B7	1085 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	BICD2	Q8TD16	824 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	NELL1	Q92832	810 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	GJA10	Q969M2	543 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	MBOAT7	Q96N66	472 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	COLEC11	Q9BWP8	271 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	FNIP2	Q9P278	1114 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	CDH7	Q9ULB5	785 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	USP18	Q9UMW8	372 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	MTF2	Q9Y483	593 aa	Predicted RBP	11.86	□□□□□ -0.51
APTX-222	ENST00000478279	COL4A3BP	Q9Y5P4	624 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	ATRX	P46100	2492 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	BAHCC1	Q9P281	2608 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	F5	P12259	2224 aa		11.86	□□□□□ -0.51
APTX-222	ENST00000478279	KLF18	A0A0U1RQI7	1052 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	ARL5C	A6NH57	179 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	LILRB5	O75023	590 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	PFKP	Q01813	784 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	B3GNT9	Q6UX72	402 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	ANO5	Q75V66	913 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	MTSS1L	Q765P7	747 aa		11.85	□□□□□ -0.51
APTX-222	ENST00000478279	DHX32	Q7L7V1	743 aa	Known RBP	11.85	□□□□□ -0.51
APTX-222	ENST00000478279	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.85	□□□□□ -0.51
APTX-222	ENST00000478279	SMG8	Q8ND04	991 aa	Known RBP	11.85	□□□□□ -0.51
APTX-222	ENST00000478279	TCEANC2	Q96MN5	208 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms