RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 UNC13DQ70J99 1090 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 ZNF720Q7Z2F6 126 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 MRPL10Q7Z7H8 261 aaKnown RBP14.42□□□□□ -0.1
TOP3A-205ENST00000477508 ZNF598Q86UK7 904 aaKnown RBP14.42□□□□□ -0.1
TOP3A-205ENST00000477508 SFR1Q86XK3 245 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 CMTR2Q8IYT2 770 aaKnown RBP14.42□□□□□ -0.1
TOP3A-205ENST00000477508 ABI1Q8IZP0 508 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 FMR1NBQ8N0W7 255 aaPredicted RBP14.42□□□□□ -0.1
TOP3A-205ENST00000477508 SP7Q8TDD2 431 aaPredicted RBP14.42□□□□□ -0.1
TOP3A-205ENST00000477508 STAMQ92783 540 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 CPB2Q96IY4 423 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 TIGD1Q96MW7 591 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 GOLPH3LQ9H4A5 285 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 MRPL44Q9H9J2 332 aaKnown RBP14.42□□□□□ -0.1
TOP3A-205ENST00000477508 SLC28A3Q9HAS3 691 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 TNFSF13BQ9Y275 285 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 PTPRSQ13332 1948 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 GTPBP6O43824 516 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-205ENST00000477508 PBX2P40425 430 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 TPRNQ4KMQ1 711 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 UBXN11Q5T124 520 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 NT5DC1Q5TFE4 455 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 TMCO2Q7Z6W1 182 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-205ENST00000477508 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
TOP3A-205ENST00000477508 ZNF689Q96CS4 500 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-205ENST00000477508 SAMD11Q96NU1 681 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 FIZ1Q96SL8 496 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 ACO2Q99798 780 aaKnown RBP14.41□□□□□ -0.1
TOP3A-205ENST00000477508 TMEM117Q9H0C3 514 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 TBX20Q9UMR3 447 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 EXOC7Q9UPT5 735 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 COL4A6Q14031 1691 aa14.41□□□□□ -0.1
TOP3A-205ENST00000477508 ZMYM2Q9UBW7 1377 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 CARNS1A5YM72 827 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 SOX1O00570 391 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 TOM1L1O75674 476 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 PIGRP01833 764 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 CA3P07451 260 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 ITGA4P13612 1032 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 IBSPP21815 317 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 FXR1P51114 621 aaKnown RBP eCLIP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 COASYQ13057 564 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 BTG3Q14201 252 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 ZNF697Q5TEC3 545 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 PPP2R2DQ66LE6 453 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 TAS1R3Q7RTX0 852 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 ELOA2Q8IYF1 753 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 FIBCD1Q8N539 461 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 RNF169Q8NCN4 708 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 ENGASEQ8NFI3 743 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 BICD1Q96G01 975 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 TCHPQ9BT92 498 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 TARS2Q9BW92 718 aaKnown RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 PDZD7Q9H5P4 517 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 RC3H2Q9HBD1 1191 aaKnown RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 YBX2Q9Y2T7 364 aaKnown RBP14.4□□□□□ -0.1
TOP3A-205ENST00000477508 RWDD3Q9Y3V2 267 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 IPPQ9Y573 584 aa14.4□□□□□ -0.1
TOP3A-205ENST00000477508 GOLGA6L22H0YM25 854 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 CLDN3O15551 220 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
TOP3A-205ENST00000477508 GCNT3O95395 438 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 NPTXRO95502 500 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
TOP3A-205ENST00000477508 NMT1P30419 496 aaKnown RBP14.39□□□□□ -0.11
TOP3A-205ENST00000477508 LIG4P49917 911 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 PSMD2Q13200 908 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 SNW1Q13573 536 aaKnown RBP14.39□□□□□ -0.11
TOP3A-205ENST00000477508 CUL4BQ13620 913 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 FAM26FQ5R3K3 315 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 MPZL3Q6UWV2 235 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 MAP4K3Q8IVH8 894 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 LRCH3Q96II8 777 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 STRA6Q9BX79 667 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
TOP3A-205ENST00000477508 MRPL9Q9BYD2 267 aaKnown RBP14.39□□□□□ -0.11
TOP3A-205ENST00000477508 BLZF1Q9H2G9 400 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 NKX2-4Q9H2Z4 354 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 ZNF576Q9H609 170 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 TMEM206Q9H813 350 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 PTPRHQ9HD43 1115 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 GIT1Q9Y2X7 761 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 GBF1Q92538 1859 aa14.39□□□□□ -0.11
TOP3A-205ENST00000477508 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 TBKBP1A7MCY6 615 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 HNRNPDLO14979 420 aaKnown RBP14.38□□□□□ -0.11
TOP3A-205ENST00000477508 EIF3DO15371 548 aaKnown RBP eCLIP14.38□□□□□ -0.11
TOP3A-205ENST00000477508 PRPF40AO75400 957 aaKnown RBP14.38□□□□□ -0.11
TOP3A-205ENST00000477508 PPP1R37O75864 691 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 MCF2P10911 925 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 FGFR1P11362 822 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 MYOGP15173 224 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 PROZP22891 400 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 TAP1Q03518 808 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms