RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 ANKRD62A6NC57 917 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 GOLGA6CA6NDK9 693 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 ATMINO43313 823 aaPredicted RBP9.65□□□□□ -0.86
CCDC66-216ENST00000476142 GOLGA6DP0CG33 693 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 TNFRSF8P28908 595 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 ZNF211Q13398 564 aaPredicted RBP9.65□□□□□ -0.86
CCDC66-216ENST00000476142 GNPTABQ3T906 1256 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 LEKR1Q6ZMV7 388 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 CATSPERGQ6ZRH7 1159 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 SEPT14Q6ZU15 432 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 CYFIP1Q7L576 1253 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 ANKRD35Q8N283 1001 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 UPF1Q92900 1129 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC66-216ENST00000476142 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 IFT74Q96LB3 600 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 FAM213AQ9BRX8 229 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 ATP6V0A4Q9HBG4 840 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 GOLGA6AQ9NYA3 693 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 COG5Q9UP83 839 aa9.65□□□□□ -0.86
CCDC66-216ENST00000476142 PFASO15067 1338 aa9.65□□□□□ -0.87
CCDC66-216ENST00000476142 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.87
CCDC66-216ENST00000476142 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 MAFGO15525 162 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 DKC1O60832 514 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 FGGP02679 453 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 OAZ1P54368 228 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 MFAP3P55082 362 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 HNRNPH2P55795 449 aaKnown RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 SNRPFP62306 86 aaKnown RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 KRT39Q6A163 491 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 MIS18BP1Q6P0N0 1132 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 SLC47A2Q86VL8 602 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 CAVIN3Q969G5 261 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 HES6Q96HZ4 224 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 CYP26B1Q9NR63 512 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 DAAM1Q9Y4D1 1078 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 SART1O43290 800 aaKnown RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 DGAT1O75907 488 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 KRT5P13647 590 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 POLGP54098 1239 aaPredicted RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 CNTN2Q02246 1040 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 DNAJC21Q5F1R6 531 aaKnown RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 LMBRD2Q68DH5 695 aaPredicted RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 SLC39A4Q6P5W5 647 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC66-216ENST00000476142 MCPH1Q8NEM0 835 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 PARD3BQ8TEW8 1205 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 TMEM143Q96AN5 459 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 CDHR1Q96JP9 859 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 C12orf42Q96LP6 360 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 KREMEN1Q96MU8 473 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 SENP7Q9BQF6 1050 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 PI4K2AQ9BTU6 479 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 HOXC10Q9NYD6 342 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 PSD3Q9NYI0 1048 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 AMACRQ9UHK6 382 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 ATP8B3O60423 1300 aa9.64□□□□□ -0.87
CCDC66-216ENST00000476142 MAPK13O15264 365 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 MMEP08473 750 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 COPB2P35606 906 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 LIG4P49917 911 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 ERVK-9P63128 1117 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 SP2Q02086 613 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 FSTL1Q12841 308 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 ZSCAN26Q16670 478 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 CFAP58Q5T655 872 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 SCFD2Q8WU76 684 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 SPIRE2Q8WWL2 714 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 DHX38Q92620 1227 aaKnown RBP9.63□□□□□ -0.87
CCDC66-216ENST00000476142 NT5C1BQ96P26 610 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 PCDHB18PQ96TA0 734 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 TMEM8AQ9HCN3 771 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 XPNPEP1Q9NQW7 623 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 GPRC5DQ9NZD1 345 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 OPA1O60313 960 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 STBD1O95210 358 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 CALCAP01258 141 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 HIRAP54198 1017 aaPredicted RBP9.63□□□□□ -0.87
CCDC66-216ENST00000476142 GPC5P78333 572 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 PPATQ06203 517 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 CYP24A1Q07973 514 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 MESDQ14696 234 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 TREML2Q5T2D2 321 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 USP37Q86T82 979 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 RHOT2Q8IXI1 618 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 GPD1LQ8N335 351 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 EPS8L1Q8TE68 723 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 CNKSR2Q8WXI2 1034 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 HVCN1Q96D96 273 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 ZIM3Q96PE6 472 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 CELF4Q9BZC1 486 aaKnown RBP9.63□□□□□ -0.87
CCDC66-216ENST00000476142 TRIM31Q9BZY9 425 aa9.63□□□□□ -0.87
CCDC66-216ENST00000476142 TAF1DQ9H5J8 278 aaPredicted RBP9.63□□□□□ -0.87
CCDC66-216ENST00000476142 ADAMTS5Q9UNA0 930 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms